Gene detail

Detailed information of g1713.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_028417274.1, uncharacterized protein LOC114541673 [Dendronephthya gigantea]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O77814	Creatine kinase S-type, mitochondrial OS=Oryctolagus cuniculus OX=9986 GN=CKMT2 PE=2 SV=1
Q6P8J7	Creatine kinase S-type, mitochondrial OS=Mus musculus OX=10090 GN=Ckmt2 PE=1 SV=1
P09605	Creatine kinase S-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002161 (this species only)
Orthogroup (gene family)	OG0005150 (this species only)
Orthogroup (gene family)	OG0017627 (this species only)
Orthogroup (gene family)	OG0021002 (this species only)
Orthogroup (gene family)	OG0059649 (this species only)
Orthogroup (gene family)	OG0080500 (this species only)
Orthogroup (gene family)	OG0174099 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02919 all species →	Topoisom_I_N	Eukaryotic DNA topoisomerase I, DNA binding fragment	Family	Interproscan
PF09334 all species →	tRNA-synt_1g	tRNA synthetases class I (M)	Family	Interproscan
PF19303 all species →	Anticodon_3	Anticodon binding domain of methionyl tRNA ligase	Domain	Interproscan
PF05380 all species →	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036802 all species →	Homologous_superfamily	ATP:guanido phosphotransferase, N-terminal domain superfamily	Interproscan
IPR013034 all species →	Homologous_superfamily	DNA topoisomerase I, DNA binding, N-terminal domain 1	Interproscan
IPR051062 all species →	Family	DNA topoisomerase IB	Interproscan
IPR036202 all species →	Homologous_superfamily	DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamily	Interproscan
IPR008336 all species →	Domain	DNA topoisomerase I, DNA binding, eukaryotic-type	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR023458 all species →	Family	Methionine-tRNA ligase, type 1	Interproscan
IPR041872 all species →	Domain	Methionyl-tRNA synthetase, anticodon-binding domain	Interproscan
IPR015413 all species →	Domain	Methionyl/Leucyl tRNA synthetase	Interproscan
IPR033911 all species →	Domain	Methioninyl-tRNA synthetase core domain	Interproscan
IPR009080 all species →	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan
IPR008042 all species →	Family	Retrotransposon, Pao	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10290 all species →	DNA TOPOISOMERASE I	Interproscan
PTHR45765 all species →	METHIONINE--TRNA LIGASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0003917 all species →	Molecular Function	DNA topoisomerase type I (single strand cut, ATP-independent) activity	Interproscan
GO:0006265 all species →	Biological Process	DNA topological change	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0007059 all species →	Biological Process	chromosome segregation	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0004825 all species →	Molecular Function	methionine-tRNA ligase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006431 all species →	Biological Process	methionyl-tRNA aminoacylation	Interproscan
GO:0017101 all species →	Cellular Component	aminoacyl-tRNA synthetase multienzyme complex	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g1713.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.