Gene detail

Detailed information of g1716.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_034318409.1, piggyBac transposable element-derived protein 4-like [Crassostrea gigas]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O13065	Matrix metalloproteinase-18 OS=Xenopus laevis OX=8355 GN=mmp18 PE=2 SV=1
Q10835	Collagenase 3 (Fragment) OS=Xenopus laevis OX=8355 GN=mmp13 PE=2 SV=1
Q63341	Macrophage metalloelastase OS=Rattus norvegicus OX=10116 GN=Mmp12 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02210	Laminin_G_2	Laminin G domain	Domain	Interproscan
PF01471	PG_binding_1	Putative peptidoglycan binding domain	Domain	Interproscan
PF01549	ShK	ShK domain-like	Domain	Interproscan
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001791	Domain	Laminin G domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR002477	Domain	Peptidoglycan binding-like	Interproscan
IPR033739	Domain	Peptidase M10A, catalytic domain	Interproscan
IPR003582	Domain	ShKT domain	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR021190	Family	Peptidase M10A	Interproscan
IPR036365	Homologous_superfamily	PGBD-like superfamily	Interproscan
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10201	MATRIX METALLOPROTEINASE	Interproscan
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0030574	Biological Process	collagen catabolic process	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan