Detailed information of g17169.t1 in Acropora digitifera

Genomic Location: chr8Alt:6375504...6424765
NR annotation: XP_029208379.2, streptococcal hemagglutinin-like isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF01390
all species →		SEASEA domainFamilyInterproscan
PF12947
all species →		EGF_3EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000082
all species →		DomainSEA domainInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR036364
all species →		Homologous_superfamilySEA domain superfamilyInterproscan
IPR024731
all species →		DomainEGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039
all species →		FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g17169.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP