Detailed information of g17188.t1 in Montipora capitata

Genomic Location: Sc0000760:3295...18794
NR annotation: XP_015778312.1, PREDICTED: ubiquitin conjugation factor E4 B-like [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ES00Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=3
O95155Ubiquitin conjugation factor E4 B OS=Homo sapiens OX=9606 GN=UBE4B PE=1 SV=1
Q9LF41Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana OX=3702 GN=PUB1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003726 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10408
all species →		Ufd2P_coreUbiquitin elongating factor coreFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045132
all species →		FamilyUbiquitin conjugation factor E4Interproscan
IPR019474
all species →		DomainUbiquitin conjugation factor E4, coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13931
all species →		UBIQUITINATION FACTOR E4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000151
all species →		Cellular Componentubiquitin ligase complexInterproscan
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0030433
all species →		Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0034450
all species →		Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0036503
all species →		Biological ProcessERAD pathwayInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g17188.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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