Gene detail

Detailed information of g17254.t1 in Montipora capitata

Genomic Location: Sc0000766:91810...124309
NR annotation: XP_044176417.1, LOW QUALITY PROTEIN: mitofusin-2-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g17254.t1

atgaggaattcttctcagttcaagcgagcgctgtccatgaaagacggcgaaatgaatggggtaaatggtgtctctcctctacgaaacttcgtgaaagccaaacagaagattaactccactttcggtcacatcggcaagtttctcgaggactgcaacacttttttattggaatgtgaaatagctggtgatagtaatgaagatatcaagaagttttctaaggaggtatctggctttttagcccaagtttccagcatatcagaggtgttagcacgggatcaaatgaaagttgcattctttggccgcaccagcaatggaaagagtacgactgttaatgcaatgttacaagacaagatccttccaatgggtattggccacacaactaactgttttttgagtgttcatggctctgatctaccagacccgtatattttaacggcagacagcaatgataaaagaaatgttaagtctttatctcagttggctcatgcattgtgtgacgaaaaacttgatcacagtagtcttgtgcaagtgttttggccaaagacaaggtgtaaaatgctgtctgaagatgtagttttagttgatagtcctggtattgatgtcagccctgatcttgacttgtggattgacaagcattgcctggatgcagatgtttttgtactggttgctaatgcagagtcaactctaatggtgacggaaaagaacttttttcacaaagtcagtcaacgcctttcacgaccaaacatcttcatcctcaacaacagatgggatgcatctgcatcagaaccagacacaatggagctggtgaaaaatcaacatcttgataggaacatcagtttcctggttgatgaattaaaatgtgtagacagagctcaagctgaggatagggtgttctttgtttcagcaaaggagactttaatgactagaatgcagaaacataaggggatgccacaggaaggtggcgccatacatgttgaaggcttccaagccaggcagctggagtttgaaaactttgaaataaaatttgaggagtgtatttctaagtcagctatacagaccaaatttgaatctcatgctgttagtggactgaaaattgccaacacggtgaaggagattatggagcagattgttggctgtgcattccagcaaaggtctcgtcttgagaaagccaagaaagaacaagaggatagactggaatatgtcaaggaacagctggagctctgcagtcatgatgccaaaaggcggatcaaagaaatcacatctaaagttgaaggacaggtgaccgacgccatgactgaagagattggccgtttaggattacttgtgaacgagttcgaccatccatttcatcctcatcctggcttccttaaaacttataaaaaggagctgtacaatcacctggagagaggattggggaggaacatgactgctcgttgctccagttctcagactcaagttatcagtgaagctcagagagatatggcggaccgcctgcgaagtctccttcctcctgaagcacctgagatttgtcttgaacctgctgcttcagcccttgatttccaagcaagttacaagttggacgtaccaagtttatgtatcgactttgaggaagatatagaatttcactttagtcttggatggcaggccattttaaggaagttcttagcaccacacaatgcaagtctagccattgctttgggagccaatcttcaaaggaatgttcagggtctggtaccaactgcgcagtacaacacgcagtcttcccagaccaactcaacacgcgaggtaatgaggaggcccgagggtgatgaagtcgccgtagctgttatttctggacttgcttcactgacgtcacgcaccgggacgttggtggttatcattggtggactgatctggaagacagtgggttggaagtttattgcgctgtgcggcggtctttacagtggagtgtatgttatagagagactccgttggaccaacagtgctaaggaaaagagtttcaaacgtcagtttgtggagtatgcaactgaaaagctccaattggtagtgagtttcacaagcgccaattgtagtatccaagtgcaacaagagctgacgtcctcgttcgtgaaactgaaatcgcttgttcaacgagcgaaggaatctctagaggaaaacatcctcgagctgtgcaaggaaatcaccaaactggagaaaatcgaaaatgaagctaagatattaaggaacaaagcaagttggtttgagagcgagctggcacagtttatcaccgagtttggtttggccaaaagcaagatctaa

Transcript

g17254.t1

ATGAGGAATTCTTCTCAGTTCAAGCGAGCGCTGTCCATGAAAGACGGCGAAATGAATGGGGTAAATGGTGTCTCTCCTCTACGAAACTTCGTGAAAGCCAAACAGAAGATTAACTCCACTTTCGGTCACATCGGCAAGTTTCTCGAGGACTGCAACACTTTTTTATTGGAATGTGAAATAGCTGGTGATAGTAATGAAGATATCAAGAAGTTTTCTAAGGAGGTATCTGGCTTTTTAGCCCAAGTTTCCAGCATATCAGAGGTGTTAGCACGGGATCAAATGAAAGTTGCATTCTTTGGCCGCACCAGCAATGGAAAGAGTACGACTGTTAATGCAATGTTACAAGACAAGATCCTTCCAATGGGTATTGGCCACACAACTAACTGTTTTTTGAGTGTTCATGGCTCTGATCTACCAGACCCGTATATTTTAACGGCAGACAGCAATGATAAAAGAAATGTTAAGTCTTTATCTCAGTTGGCTCATGCATTGTGTGACGAAAAACTTGATCACAGTAGTCTTGTGCAAGTGTTTTGGCCAAAGACAAGGTGTAAAATGCTGTCTGAAGATGTAGTTTTAGTTGATAGTCCTGGTATTGATGTCAGCCCTGATCTTGACTTGTGGATTGACAAGCATTGCCTGGATGCAGATGTTTTTGTACTGGTTGCTAATGCAGAGTCAACTCTAATGGTGACGGAAAAGAACTTTTTTCACAAAGTCAGTCAACGCCTTTCACGACCAAACATCTTCATCCTCAACAACAGATGGGATGCATCTGCATCAGAACCAGACACAATGGAGCTGGTGAAAAATCAACATCTTGATAGGAACATCAGTTTCCTGGTTGATGAATTAAAATGTGTAGACAGAGCTCAAGCTGAGGATAGGGTGTTCTTTGTTTCAGCAAAggagACTTTAATGACTAGAATGCAGAAACATAAGGGGATGCCACAGGAAGGTGGCGCCATACATGTTGAAGGCTTCCAAGCCAGGCAGCTGGagtttgaaaactttgaaataaaatttgagGAGTGTATTTCTAAGTCAGCTATACAGACCAAATTTGAATCTCATGCTGTTAGTGGACTGAAAATTGCCAACACGGTGAAGGAGATTATGGAGCAGATTGTTGGCTGTGCATTCCAGCAAAGGTCTCGTCTTGAGAAAGCcaagaaagaacaagaggatagACTGGAATATGTCAAGGAACAGCTGGAGCTCTGCAGTCATGATGCCAAAAGGCGGATCAAAGAAATCACATCTAAAGTTGAAGGACAGGTGACCGACGCCATGACTGAAGAGATTGGCCGTTTAGGATTACTTGTGAACGAGTTCGACCATCCATTTCATCCTCATCCTGGCTTCCTTAAAACTTATAAAAAGGAGCTGTACAATCACCTGGAGAGAGGATTGGGGAGGAACATGACTGCTCGTTGCTCCAGTTCTCAGACTCAAGTTATCAGTGAAGCTCAGAGAGATATGGCGGACCGCCTGCGAAGTCTCCTTCCTCCTGAAGCACCTGAGATTTGTCTTGAACCTGCTGCTTCAGCCCTTGATTTCCAAGCAAGTTACAAGTTGGACGTACCAAGTTTATGTATCGACTTTGAGGAAGATATAGAATTTCACTTTAGTCTTGGATGGCAGGCCATTTTAAGGAAGTTCTTAGCACCACACAATGCAAGTCTAGCCATTGCTTTGGGAGCCAATCTTCAAAGGAATGTTCAGGGTCTGGTACCAACTGCGCAGTACAACACGCAGTCTTCCCAGACCAACTCAACACGCGAGGTAATGAGGAGGCCCGAGGGTGATGAAGTCGCCGTAGCTGTTATTTCTGGACTTGCTTCACTGACGTCACGCACCGGGACGTTGGTGGTTATCATTGGTGGACTGATCTGGAAGACAGTGGGTTGGAAGTTTATTGCGCTGTGCGGCGGTCTTTACAGTGGAGTGTATGTTATAGAGAGACTCCGTTGGACCAACAGTGCTAAGGAAAAGAGTTTCAAACGTCAGTTTGTGGAGTATGCAACTGAAAAGCTCCAATTGGTAGTGAGTTTCACAAGCGCCAATTGTAGTATCCAAGTGCAACAAGAGCTGACGTCCTCGTTCGTGAAACTGAAATCGCTTGTTCAACGAGCGAAGGAATCTCTAGAGGAAAACATCCTCGAGCTGTGCAAGGAAATCACCAAACTGGAGAAAATCGAAAATGAAGCTAAGATATTAAGGAACAAAGCAAGTTGGTTTGAGAGCGAGCTGGCACAGTTTATCACCGAGTTTGGTTTGGCCAAAAGCAAGATCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95140	Mitofusin-2 OS=Homo sapiens OX=9606 GN=MFN2 PE=1 SV=3
Q8R500	Mitofusin-2 OS=Rattus norvegicus OX=10116 GN=Mfn2 PE=1 SV=1
Q80U63	Mitofusin-2 OS=Mus musculus OX=10090 GN=Mfn2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003175 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan
PF04799 all species →	Fzo_mitofusin	fzo-like conserved region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR030381 all species →	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan
IPR027094 all species →	Family	Mitofusin family	Interproscan
IPR006884 all species →	Domain	Fzo/mitofusin HR2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10465 all species →	TRANSMEMBRANE GTPASE FZO1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005741 all species →	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0008053 all species →	Biological Process	mitochondrial fusion	Interproscan
GO:0031306 all species →	Cellular Component	obsolete intrinsic component of mitochondrial outer membrane	Interproscan
GO:0051646 all species →	Biological Process	mitochondrion localization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g17254.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.