Gene detail

Detailed information of g1727.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAH3144812.1, unnamed protein product [Porites lobata]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3ZGQ5	Serine/threonine-protein kinase Nek8 OS=Rattus norvegicus OX=10116 GN=Nek8 PE=1 SV=1
Q90XC2	Serine/threonine-protein kinase Nek8 OS=Danio rerio OX=7955 GN=nek8 PE=2 SV=1
Q91ZR4	Serine/threonine-protein kinase Nek8 OS=Mus musculus OX=10090 GN=Nek8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000005 (this species only)
Orthogroup (gene family)	OG0004216 (this species only)
Orthogroup (gene family)	OG0008802 (this species only)
Orthogroup (gene family)	OG0036226 (this species only)
Orthogroup (gene family)	OG0080449 (this species only)
Orthogroup (gene family)	OG0172975 (this species only)
Orthogroup (gene family)	OG0173767 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00241 all species →	Cofilin_ADF	Cofilin/tropomyosin-type actin-binding protein	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF13540 all species →	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017904 all species →	Family	ADF/Cofilin	Interproscan
IPR002108 all species →	Domain	Actin-depolymerising factor homology domain	Interproscan
IPR029006 all species →	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR017972 all species →	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR051997 all species →	Family	Serine/threonine-protein kinase NEK	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR024132 all species →	Family	Akirin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11913 all species →	COFILIN-RELATED	Interproscan
PTHR44535 all species →	PROTEIN CBG16200	Interproscan
PTHR13293 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0030042 all species →	Biological Process	actin filament depolymerization	Interproscan
GO:0030043 all species →	Biological Process	actin filament fragmentation	Interproscan
GO:0030479 all species →	Cellular Component	actin cortical patch	Interproscan
GO:0051014 all species →	Biological Process	actin filament severing	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045089 all species →	Biological Process	positive regulation of innate immune response	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20877	NEK8; serine/threonine-protein kinase Nek8	EC:2.7.11.1	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.