Gene detail

Detailed information of g1739.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO39905.1, predicted protein [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q8NFA0	Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens OX=9606 GN=USP32 PE=1 SV=1
F8VPZ3	Ubiquitin carboxyl-terminal hydrolase 32 OS=Mus musculus OX=10090 GN=Usp32 PE=2 SV=1
P35125	Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens OX=9606 GN=USP6 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08238	Sel1	Sel1 repeat	Repeat	Interproscan
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF02926	THUMP	THUMP domain	Domain	Interproscan
PF01170	UPF0020	Putative RNA methylase family UPF0020	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050767	Family	Sel1/AlgK	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR050185	Family	Ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR000629	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR050079	Family	DEAD box RNA helicase	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR004114	Domain	THUMP domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR000241	Domain	Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11102	SEL-1-LIKE PROTEIN	Interproscan
PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan
PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	Interproscan
PTHR14911	THUMP DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0036503	Biological Process	ERAD pathway	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0000027	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0016423	Molecular Function	tRNA (guanine) methyltransferase activity	Interproscan
GO:0030488	Biological Process	tRNA methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07126	K07126; uncharacterized protein	-	Messenger RNA biogenesis	ko03019	deepkoala
K07126	K07126; uncharacterized protein	-	Function unknown	-	deepkoala