Detailed information of g175.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3151698.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3T035Actin-related protein 2/3 complex subunit 3 OS=Bos taurus OX=9913 GN=ARPC3 PE=1 SV=3
O15145Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens OX=9606 GN=ARPC3 PE=1 SV=3
Q9JM76Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17682Tau95_NTau95 Triple barrel domainDomainInterproscan
PF09734Tau95RNA polymerase III transcription factor (TF)IIIC subunit HTH domainFamilyInterproscan
PF07787TMEM43Transmembrane protein 43FamilyInterproscan
PF04062P21-ArcARP2/3 complex ARPC3 (21 kDa) subunitFamilyInterproscan
PF08393DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF08385DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan
PF10644Misat_Tub_SegIIMisato Segment II tubulin-like domainDomainInterproscan
PF14881Tubulin_3Tubulin domainDomainInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF01636APHPhosphotransferase enzyme familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR042536Homologous_superfamilyTFIIIC, subcomplex tauA subunit Sfc1, triple barrel domain superfamilyInterproscan
IPR040454FamilyTranscription factor IIIC subunit Tfc1/Sfc1Interproscan
IPR041499DomainTranscription factor IIIC subunit Tfc1/Sfc1, triple barrel domainInterproscan
IPR019136DomainTranscription factor IIIC subunit 5, HTH domainInterproscan
IPR012430FamilyTransmembrane protein 43 familyInterproscan
IPR007204FamilyActin-related protein 2/3 complex subunit 3Interproscan
IPR036753Homologous_superfamilyActin-related protein 2/3 complex subunit 3 superfamilyInterproscan
IPR013602DomainDynein heavy chain, linkerInterproscan
IPR042222Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR013594DomainDynein heavy chain, tailInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR019605DomainMisato Segment II tubulin-like domainInterproscan
IPR029209DomainDML1/Misato, tubulin domainInterproscan
IPR049942FamilyDML1/MisatoInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR001810DomainF-box domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR051492FamilyDynamin-binding and Rho GEFInterproscan
IPR002575DomainAminoglycoside phosphotransferaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR13230GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5Interproscan
PTHR13416UNCHARACTERIZEDInterproscan
PTHR12391ARP2/3 COMPLEX 21 KD SUBUNITInterproscan
PTHR10676DYNEIN HEAVY CHAIN FAMILY PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13391MITOCHONDRIAL DISTRIBUTION REGULATOR MISATOInterproscan
PTHR20933F-BOX ONLY PROTEIN 33Interproscan
PTHR22834NUCLEAR FUSION PROTEIN FUS2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000127Cellular Componenttranscription factor TFIIIC complexInterproscan
GO:0001002Molecular FunctionRNA polymerase III type 1 promoter sequence-specific DNA bindingInterproscan
GO:0001003Molecular FunctionRNA polymerase III type 2 promoter sequence-specific DNA bindingInterproscan
GO:0006384Biological Processtranscription initiation at RNA polymerase III promoterInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0005639Cellular Componentobsolete integral component of nuclear inner membraneInterproscan
GO:0006629Biological Processlipid metabolic processInterproscan
GO:0071763Biological Processnuclear membrane organizationInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005885Cellular ComponentArp2/3 protein complexInterproscan
GO:0034314Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0030833Biological Processregulation of actin filament polymerizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0060294Biological Processcilium movement involved in cell motilityInterproscan
GO:0097729Cellular Component9+2 motile ciliumInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0031398Biological Processpositive regulation of protein ubiquitinationInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05756ARPC3; actin related protein 2/3 complex, subunit 3-Cytoskeleton proteinsko04812deepkoala

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