Gene detail

Detailed information of g1755.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_031566569.1, mediator of RNA polymerase II transcription subunit 1-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q925J9	Mediator of RNA polymerase II transcription subunit 1 OS=Mus musculus OX=10090 GN=Med1 PE=1 SV=2
Q15648	Mediator of RNA polymerase II transcription subunit 1 OS=Homo sapiens OX=9606 GN=MED1 PE=1 SV=4
Q5RES4	Mediator of RNA polymerase II transcription subunit 1 OS=Pongo abelii OX=9601 GN=MED1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00854	PTR2	POT family	Family	Interproscan
PF06155	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan
PF10744	Med1	Mediator of RNA polymerase II transcription subunit 1	Domain	Interproscan
PF01555	N6_N4_Mtase	DNA methylase	Family	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR000109	Family	Proton-dependent oligopeptide transporter family	Interproscan
IPR010376	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan
IPR042098	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR038492	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR051999	Family	Mediator complex subunit 1	Interproscan
IPR019680	Domain	Mediator complex, subunit Med1	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR002941	Domain	DNA methylase N-4/N-6	Interproscan
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR002295	Family	N4/N6-methyltransferase, Type III restriction-modification enzyme EcoPI Mod subunit-like	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11654	OLIGOPEPTIDE TRANSPORTER-RELATED	Interproscan
PTHR12881	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1	Interproscan
PTHR13370	RNA METHYLASE-RELATED	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016592	Cellular Component	mediator complex	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0008170	Molecular Function	N-methyltransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0032259	Biological Process	methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07316	mod; adenine-specific DNA-methyltransferase	EC:2.1.1.72	Prokaryotic defense system	ko02048	deepkoala