Gene detail

Detailed information of g17633.t1 in Montipora capitata

Genomic Location: Sc0000803:63142...69509
NR annotation: XP_044179669.1, uncharacterized protein LOC122961151 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

g17633.t1

atgaacattgacgttttggctcgcgttcggccgtccaaacacggagagcaactttcgttgaatattgcagggactcgtatacaggcaggtgatggaactggccatatttttggttcggtttacaaacccgagtctctcactcacgatatcttccgagatgccttctctccacttgtcgaactgttcattgctggatacaatgtttgtgcgttagtttttggcgaaactggatcaggaaagtcttactccttggcaggggagaaaaattcaaaggctggcctcatccctctaataatcaactctgtttttacgcgaataaatagtgaaagatcatcagggagagatgtcagagtgcaacgaaatgaccttaacgacggcgttgtttttgtgcagtttgtcgaggtctacaacgagaaattaagagatcttcttgtgctgcctcacgaagacagacacatagatgtagctgaagatggtcaaaatggagttcatgtgcagaatgctacatacaaaagagttgctaatgctgcagaatgcaccagcttgtttcggcaaggttgggcaatcaaaacaaaaccacaaacagattttgagccaagagcagctgtgtttttttctttggacttaacaatgaatattttcatattagagaaatggtattttttcattggtgactatagaccgatccaaggttatcgatgccattttgtaaagggtgcaaaaccactggggagagcgcgcggccaaactaatggcgacgcatttaccatgccgaaacacgcgcattgttgtgttggattttgtgataacgacaagcgatttcccaacttagtagttgtgagatctcacgtaaaagaattgaaattccataggtggccaaaagacccaaatttagctgaattgtggaggaaacaagttgcgaaaggacggagtgataacttcagtcccgaacctggatcggagggcacatttgtctgttcaaatcactttcctgagggcacgagaactcgccacaatccaagtactgactatccttcggttttcttaacattaagcgactttctcaacaagccatcgccaaaaaaacgcaaagttagtgaacgtttagtcagcgaagaaaatgaagatgaagtaacaactgcggaggggactgtggggcgggctgacaaggaagatgatctagatcacgatgatttacatttaagagtctcaatgcgatttgagcaaagttcaagggaagcagatgtgaaaacattcgcaggcctaccttcaacaaagtgcttcaaatgtatttttgatcacctcttccccaaagcccaacatatgcagtactggagaggaccaaaacagacaacaagagaagcacctcaagaccattgtgaccctggcataggcttgccaaaatgtcgcccaggaccgggaagaatgctagacttagaacaagaattccttttgacaatgatgaagttgaaattgggtctcattaacgaagatctggcattcagatttatggtctcttcaactactgtcagcagtgtatttattacatggattaaattgatgtccaaagagctgtcagtcttaatcatctggccaagcaaacaacaagtaaaaaacactttgccagcttgtttcaagaaattatacccaaaagggcaatttcctatgtttctcaaagctatgggggaagggcatcagatgcctttattttcagagactggttttctgaacatcattgagccatatgatgaagtaatggcggacaggggatttaaaagaaaagaagacctaatgatgtctatggctacattatgtatcccacctagctgcactgcctctatgcagatgttaccctcagatgtcagaaagacatcaaatattgcaaatgttagaatatatgttgaacaagctattggaagagtaaaaaggtttcatattttgaaaaatgaactgcctataactctactacctcttgtggatgatatcgttagagtatgctgtgcattgtgtaacttacttccacctctttgtgagtaa

Transcript

g17633.t1

ATGAACATTGACGTTTTGGCTCGCGTTCGGCCGTCCAAACACGGAGAGCAACTTTCGTTGAATATTGCAGGGACTCGTATACAGGCAGGTGATGGAACTGGCCATATTTTTGGTTCGGTTTACAAACCCGAGTCTCTCACTCACGATATCTTCCGAGATGCCTTCTCTCCACTTGTCGAACTGTTCATTGCTGGATACAATGTTTGTGCGTTAGTTTTTGGCGAAACTGGATCAGGAAAGTCTTACTCCTTGGCAGGGGAGAAAAATTCAAAGGCTGGCCTCATCCCTCTAATAATCAACTCTGTTTTTACGCGAATAAATAGTGAAAGATCATCAGGGAGAGATGTCAGAGTGCAACGAAATGACCTTAACGACGGCGTTGTTTTTGTGCAGTTTGTCGAGGTCTACAACGAGAAATTAAGAGATCTTCTTGTGCTGCCTCACGAAGACAGACACATAGATGTAGCTGAAGATGGTCAAAATGGAGTTCATGTGCAGAATGCTACATACAAAAGAGTTGCTAATGCTGCAGAATGCACCAGCTTGTTTCGGCAAGGTTGGGCAATCAAAACAAAACCACAAACAGATTTTGAGCCAAGAGCAgctgtgtttttttctttggacTTAACAATGAATATTTTCATATTAGAGAAATGGTATTTTTTCATTGGTGACTATAGACCGATCCAAGGTTATCGATGCCATTTTGTAAAGGGTGCAAAACCACTGGGGAGAGCGCGCGGCCAAACTAATGGCGACGCATTTACCATGCCGAAACACGCGCATTGTTGTGTTGGATTTTGTGATAACGACAAGCGATTTCCCAACTTAGTAGTTGTGAGATCTCACGTAAAAGAATTGAAATTCCATAGGTGGCCAAAAGACCCAAATTTAGCTGAATTGTGGAGGAAACAAGTTGCGAAAGGACGGAGTGATAACTTCAGTCCCGAACCTGGATCGGAGGGCACATTTGTCTGTTCAAATCACTTTCCTGAGGGCACGAGAACTCGCCACAATCCAAGTACTGACTATCCTTCGGTTTTCTTAACATTAAGCGACTTTCTCAAcaagccatcgccaaaaaaacgcaaagTTAGTGAACGTTTAGTcagcgaagaaaatgaagaTGAAGTAACAACTGCGGAGGGGACTGTGGGGCGGGCTGACAAGGAAGATGATCTAGATCACGATGATTTACATTTAAGAGTCTCAATGCGATTTGAGCAAAGTTCAAGGGAAGCAGATGTGAAAACATTCGCAGGCCTACCTTCAACAAAGTGCTTCAAATGTATTTTTGATCACCTCTTCCCCAAAGCCCAACATATGCAGTACTGGAGAGGACCAAAACAGACAACAAGAGAAGCACCTCAAGACCATTGTGACCCTGGCATAGGCTTGCCAAAATGTCGCCCAGGACCGGGAAGAATGCTAGACTTAGAACAAGAATTCCTTTTGACAATGATGAAGTTGAAATTGGGTCTCATTAACGAAGATCTGGCATTCAGATTTATGGTCTCTTCAACTACTGTCAGCAGTGTATTTATTACATGGATTAAATTGATGTCCAAAGAGCTGTCAGTCTTAATCATCTGGCCAAGCAAACAACAAGTAAAAAACACTTTGCCAGCTTGTTTCAAGAAATTATACCCAAAAGGGCAATTTCCTATGTTTCTCAAAGCTATGGGGGAAGGGCATCAGATGCCTTTATTTTCAGAGACTGGTTTTCTGAACATCATTGAGCCATATGAtgaagtaatggcggacaggggatttaaaagaaaagaagaccTAATGATGTCTATGGCTACATTATGTATCCCACCTAGCTGCACTGCCTCTATGCAGATGTTACCCTCAGATGTCAGAAAGACATCAAATATTGCAAATGTTAGAATATATGTTGAACAAGCTATTGGAAGAGTAAAAAGGtttcatattttgaaaaatgaactGCCTATAACTCTACTACCTCTTGTGGATGATATCGTTAGAGTATGCTGTGCATTGTGTAACTTACTTCCACCTCTTTGTGAGTAA

Protein

Uniprot

Uniprot term	Description
F4IIS5	Kinesin-like protein KIN-5A OS=Arabidopsis thaliana OX=3702 GN=KIN5A PE=1 SV=1
Q1MTQ1	Kinesin-like protein tea2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tea2 PE=1 SV=1
O23826	Kinesin-like protein KIN-5C OS=Nicotiana tabacum OX=4097 GN=KIN5C PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan
PF13359	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan
PF13613	HTH_Tnp_4	Helix-turn-helix of DDE superfamily endonuclease	Domain	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR027806	Domain	Harbinger transposase-derived nuclease domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027805	Domain	Transposase, Helix-turn-helix domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23080	THAP DOMAIN PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan