Detailed information of g1777.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_034254731.1, 5'-3' exoribonuclease 1 [Thrips palmi]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P977895'-3' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Xrn1 PE=1 SV=1
Q8IZH25'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 SV=1
Q9UKU0Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens OX=9606 GN=ACSL6 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF18334XRN1_D2_D3Exoribonuclease Xrn1 D2/D3 domainDomainInterproscan
PF18129SH3_12Xrn1 SH3-like domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR047008Homologous_superfamily5'-3' exoribonuclease 1, SH3-like domain superfamilyInterproscan
IPR041106DomainExoribonuclease Xrn1, D2/D3 domainInterproscan
IPR041385Domain5'-3' exoribonuclease 1, SH3-like domainInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR053235FamilySer/Thr Protein KinaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43272LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan
PTHR24361MITOGEN-ACTIVATED KINASE KINASE KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001676Biological Processlong-chain fatty acid metabolic processInterproscan
GO:0004467Molecular Functionlong-chain fatty acid-CoA ligase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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