Detailed information of g17800.t1 in Montipora capitata

Genomic Location: Sc0000819:137606...142314
NR annotation: XP_015751441.1, PREDICTED: uncharacterized protein LOC107331377 isoform X1 [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NBJ9SID1 transmembrane family member 2 OS=Homo sapiens OX=9606 GN=SIDT2 PE=1 SV=2
Q8CIF6SID1 transmembrane family member 2 OS=Mus musculus OX=10090 GN=Sidt2 PE=1 SV=1
D3ZEH5SID1 transmembrane family member 2 OS=Rattus norvegicus OX=10116 GN=Sidt2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001213 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13965
all species →		SID-1_RNA_chandsRNA-gated channel SID-1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025958
all species →		FamilySID1 transmembrane familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12185
all species →		SID1 TRANSMEMBRANE FAMILY MEMEBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0003725
all species →		Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005764
all species →		Cellular ComponentlysosomeInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0050658
all species →		Biological ProcessRNA transportInterproscan
GO:0051033
all species →		Molecular FunctionRNA transmembrane transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g17800.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP