Gene detail

Detailed information of g1785.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_048583496.1, leucine-rich repeat-containing protein 49 isoform X4 [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q91YK0	Leucine-rich repeat-containing protein 49 OS=Mus musculus OX=10090 GN=Lrrc49 PE=1 SV=1
Q8IUZ0	Leucine-rich repeat-containing protein 49 OS=Homo sapiens OX=9606 GN=LRRC49 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14580	LRR_9	Leucine-rich repeat	Repeat	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050576	Family	Ciliary and flagellar integrity-associated protein	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR019786	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45973	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED	Interproscan
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007508	Biological Process	larval heart development	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0061343	Biological Process	cell adhesion involved in heart morphogenesis	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16606	LRRC49; leucine-rich repeat-containing protein 49	-	Cytoskeleton proteins	ko04812	deepkoala