Detailed information of g1790.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_033643407.1, uncharacterized protein LOC117303346 [Asterias rubens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60520Paired amphipathic helix protein Sin3a OS=Mus musculus OX=10090 GN=Sin3a PE=1 SV=3
Q96ST3Paired amphipathic helix protein Sin3a OS=Homo sapiens OX=9606 GN=SIN3A PE=1 SV=2
O75182Paired amphipathic helix protein Sin3b OS=Homo sapiens OX=9606 GN=SIN3B PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16188Peptidase_M24_CC-terminal region of peptidase_M24DomainInterproscan
PF02671PAHPaired amphipathic helix repeatRepeatInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036005Homologous_superfamilyCreatinase/aminopeptidase-likeInterproscan
IPR032416DomainPeptidase M24, C-terminal domainInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036600Homologous_superfamilyPaired amphipathic helix superfamilyInterproscan
IPR003822RepeatPaired amphipathic helixInterproscan
IPR039774FamilyTranscriptional regulatory protein Sin3-likeInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR051550FamilySCF Complex Subunits and Alginate EpimerasesInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR12346SIN3B-RELATEDInterproscan
PTHR45749-Interproscan
PTHR22990F-BOX ONLY PROTEINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0016580Cellular Componentobsolete Sin3 complexInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

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