Detailed information of g1791.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_033643407.1, uncharacterized protein LOC117303346 [Asterias rubens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O60524Ribosome quality control complex subunit NEMF OS=Homo sapiens OX=9606 GN=NEMF PE=1 SV=4
Q8CCP0Ribosome quality control complex subunit NEMF OS=Mus musculus OX=10090 GN=Nemf PE=1 SV=2
Q8BY79Solute carrier family 35 member G1 OS=Mus musculus OX=10090 GN=Slc35g1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05833NFACT_NNFACT N-terminal and middle domainsFamilyInterproscan
PF00892EamAEamA-like transporter familyFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR051608FamilyRibosome Quality Control Complex Subunit NEMFInterproscan
IPR000620DomainEamA domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR050108FamilyCyclin-dependent kinaseInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR15239NUCLEAR EXPORT MEDIATOR FACTOR NEMFInterproscan
PTHR22911ACYL-MALONYL CONDENSING ENZYME-RELATEDInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR24056CELL DIVISION PROTEIN KINASEInterproscan
PTHR33776ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:1990112Cellular ComponentRQC complexInterproscan
GO:1990116Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0000082Biological ProcessG1/S transition of mitotic cell cycleInterproscan
GO:0000307Cellular Componentcyclin-dependent protein kinase holoenzyme complexInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0004693Molecular Functioncyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0010033Biological Processobsolete response to organic substanceInterproscan
GO:0010389Biological Processregulation of G2/M transition of mitotic cell cycleInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0030332Molecular Functioncyclin bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02206CDK2; cyclin-dependent kinase 2EC:2.7.11.22
Chromosome and associated proteinsko03036deepkoala

TOP