Detailed information of g1802.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012556570.1, roundabout homolog 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O77628Protein c-Fos OS=Bos taurus OX=9913 GN=FOS PE=2 SV=2
P01100Protein c-Fos OS=Homo sapiens OX=9606 GN=FOS PE=1 SV=1
P01101Protein c-Fos OS=Mus musculus OX=10090 GN=Fos PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR000837FamilyAP-1 transcription factorInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan
PTHR23351FOS TRANSCRIPTION FACTOR-RELATEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

TOP