Genomic Location: chr8Alt:19251404...19261485
NR annotation: XP_015767814.1, PREDICTED: sacsin-like isoform X2 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families
| CDS |
| g18063.t2 |
| Transcript |
| chr8Alt.g18063.t2 |
| Protein |
| chr8Alt.g18063.t2 |
| UniProt accession | Description |
|---|---|
| Q9NZJ4 | Sacsin OS=Homo sapiens OX=9606 GN=SACS PE=1 SV=2 |
| Q9JLC8 | Sacsin OS=Mus musculus OX=10090 GN=Sacs PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05168 all species → | HEPN | HEPN domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007842 all species → | Domain | HEPN domain | Interproscan |
| IPR052972 all species → | Family | Sacsin chaperone regulator | Interproscan |
| IPR036890 all species → | Homologous_superfamily | Histidine kinase/HSP90-like ATPase superfamily | Interproscan |
| IPR036869 all species → | Homologous_superfamily | Chaperone J-domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15600 all species → | SACSIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0030544 all species → | Molecular Function | Hsp70 protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17592 | SACS; sacsin | - | Protein phosphatases and associated proteins | ko01009 | deepkoala |
Transcript abundance of g18063.t2 across 39 RNA-seq samples of Acropora digitifera. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Coral branch | 39 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (ADIGI_TPM,
StringTie quantification over 39 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.