Detailed information of g1814.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029189472.2, protein patched homolog 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35595Protein patched homolog 2 OS=Mus musculus OX=10090 GN=Ptch2 PE=2 SV=2
Q9Y6C5Protein patched homolog 2 OS=Homo sapiens OX=9606 GN=PTCH2 PE=1 SV=2
Q98864Protein patched homolog 1 OS=Danio rerio OX=7955 GN=ptch1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01266DAOFAD dependent oxidoreductaseDomainInterproscan
PF12349Sterol-sensingSterol-sensing domain of SREBP cleavage-activationFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR006076DomainFAD dependent oxidoreductaseInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13847SARCOSINE DEHYDROGENASE-RELATEDInterproscan
PTHR46022PROTEIN PATCHEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005119Molecular Functionsmoothened bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008158Molecular Functionhedgehog receptor activityInterproscan
GO:0045879Biological Processnegative regulation of smoothened signaling pathwayInterproscan
GO:0097108Molecular Functionhedgehog family protein bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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