Detailed information of g1816.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002162006.1, nuclear pore complex protein Nup50 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UKX7Nuclear pore complex protein Nup50 OS=Homo sapiens OX=9606 GN=NUP50 PE=1 SV=2
Q9JIH2Nuclear pore complex protein Nup50 OS=Mus musculus OX=10090 GN=Nup50 PE=1 SV=3
O08587Nuclear pore complex protein Nup50 OS=Rattus norvegicus OX=10116 GN=Nup50 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF08911NUP50NUP50 (Nucleoporin 50 kDa)DomainInterproscan
PF00638Ran_BP1RanBP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000156DomainRan binding domainInterproscan
IPR015007DomainNuclear pore complex, NUP2/50/61Interproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR045255FamilyRan binding protein RanBP1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240OPSINInterproscan
PTHR23138RAN BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04209NPFR; neuropeptide F receptor-Messenger RNA biogenesisko03019deepkoala
G protein-coupled receptorsko04030deepkoala

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