Gene detail

Detailed information of g18167.t1 in Acropora digitifera

Genomic Location: chr8Alt:21065643...21079019
NR annotation: XP_020602278.1, uncharacterized protein LOC110041336 isoform X2 [Orbicella faveolata]
Species abbreviation ADIGI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01223 all species →	Endonuclease_NS	DNA/RNA non-specific endonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001604 all species →	Domain	DNA/RNA non-specific endonuclease	Interproscan
IPR044925 all species →	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR044929 all species →	Homologous_superfamily	DNA/RNA non-specific endonuclease superfamily	Interproscan
IPR039015 all species →	Family	Endonuclease domain-containing 1 protein	Interproscan
IPR020821 all species →	Domain	Extracellular Endonuclease, subunit A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21472 all species →	ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g18167.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.