Detailed information of g1817.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_027052914.1, endoplasmic reticulum-Golgi intermediate compartment protein 1-like [Pocillopora damicornis]
Species Calvadosia cruxmelitensis · all data for this species · gene families

 Sequence
Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4V8Y6Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Danio rerio OX=7955 GN=ergic1 PE=2 SV=1
Q969X5Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens OX=9606 GN=ERGIC1 PE=1 SV=1
Q9DC16Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000011 (this species only)
Orthogroup (gene family)OG0000086 (this species only)
Orthogroup (gene family)OG0001776 (this species only)
Orthogroup (gene family)OG0003274 (this species only)
Orthogroup (gene family)OG0007353 (this species only)
Orthogroup (gene family)OG0027676 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF19745
all species →		FUT8_N_catAlpha-(1,6)-fucosyltransferase N- and catalytic domainsDomainInterproscan
PF07970
all species →		COPIIcoated_ERVEndoplasmic reticulum vesicle transporter FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR027350
all species →		DomainGlycosyltransferase family 23 (GT23) domainInterproscan
IPR045573
all species →		DomainAlpha-(1,6)-fucosyltransferase, N- and catalytic domainInterproscan
IPR045888
all species →		FamilyEndoplasmic reticulum vesicle transporterInterproscan
IPR012936
all species →		DomainEndoplasmic reticulum vesicle transporter, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13132
all species →		ALPHA- 1,6 -FUCOSYLTRANSFERASEInterproscan
PTHR10984
all species →		ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINInterproscan
PTHR34239
all species →		APPLE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006487
all species →		Biological Processprotein N-linked glycosylationInterproscan
GO:0036071
all species →		Biological ProcessN-glycan fucosylationInterproscan
GO:0046921
all species →		Molecular Functionalpha-(1->6)-fucosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g1817.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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