Detailed information of g1818.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ3601208.1, hypothetical protein NHX12_032181 [Muraenolepis orangiensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P06352Histone H3, embryonic OS=Strongylocentrotus purpuratus OX=7668 PE=1 SV=2
Q5TEC6Histone H3-7 OS=Homo sapiens OX=9606 GN=H3-7 PE=1 SV=1
P68432Histone H3.1 OS=Bos taurus OX=9913 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF01743PolyA_polPoly A polymerase head domainDomainInterproscan
PF12627PolyA_pol_RNAbdProbable RNA and SrmB- binding site of polymerase ADomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008211DomainLaminin, N-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000034DomainLaminin IVInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR000164FamilyHistone H3/CENP-AInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR050264FamilyBacterial CCA-adding enzyme type 3 subfamilyInterproscan
IPR002646DomainPoly A polymerase, head domainInterproscan
IPR032828DomaintRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13847SARCOSINE DEHYDROGENASE-RELATEDInterproscan
PTHR10574NETRIN/LAMININ-RELATEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR11426HISTONE H3Interproscan
PTHR46173CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00970pcnB; poly(A) polymeraseEC:2.7.7.19
Exosomeko04147deepkoala
Messenger RNA biogenesisko03019deepkoala

TOP