Detailed information of g18200.t1 in Acropora digitifera

Genomic Location: chr8Alt:21447541...21451101
NR annotation: XP_029193719.1, thrombospondin-2-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B3EWZ8Ectin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01607
all species →		CBM_14Chitin binding Peritrophin-A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR002557
all species →		DomainChitin binding domainInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036508
all species →		Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR052065
all species →		FamilyComplement and asymmetry regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906
all species →		PROPERDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0008061
all species →		Molecular Functionchitin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g18200.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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