Detailed information of g1823.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAB3996894.1, reelin isoform X5 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2A865Sodium-dependent neutral amino acid transporter B(0)AT1 OS=Rattus norvegicus OX=10116 GN=Slc6a19 PE=1 SV=2
Q9D687Sodium-dependent neutral amino acid transporter B(0)AT1 OS=Mus musculus OX=10090 GN=Slc6a19 PE=1 SV=1
Q9XS59Sodium-dependent neutral amino acid transporter B(0)AT2 OS=Bos taurus OX=9913 GN=SLC6A15 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan
PF00348polyprenyl_syntPolyprenyl synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000175FamilySodium:neurotransmitter symporterInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR008949Homologous_superfamilyIsoprenoid synthase domain superfamilyInterproscan
IPR039702FamilyFarnesyl pyrophosphate synthase-likeInterproscan
IPR033749Conserved_sitePolyprenyl synthetase, conserved siteInterproscan
IPR000092FamilyPolyprenyl synthetaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERInterproscan
PTHR11525FARNESYL-PYROPHOSPHATE SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0004161Molecular Functiondimethylallyltranstransferase activityInterproscan
GO:0004337Molecular Functiongeranyltranstransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008299Biological Processisoprenoid biosynthetic processInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0045337Biological Processfarnesyl diphosphate biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05048SLC6A15S; solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20-Transportersko02000deepkoala

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