Detailed information of g18443.t1 in Acropora digitifera

Genomic Location: chr8Alt:24947404...24981431
NR annotation: XP_044179067.1, uncharacterized protein LOC114969736 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
Q8C6K9Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a6 PE=1 SV=2
P05099Matrilin-1 OS=Gallus gallus OX=9031 GN=MATN1 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan
PF00095
all species →		WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF07648
all species →		Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002350
all species →		DomainKazal domainInterproscan
IPR008197
all species →		DomainWAP-type 'four-disulfide core' domainInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR050525
all species →		FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR036645
all species →		Homologous_superfamilyElafin-like superfamilyInterproscan
IPR036058
all species →		Homologous_superfamilyKazal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020
all species →		COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0030414
all species →		Molecular Functionpeptidase inhibitor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06238COL6A; collagen type VI alpha-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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