Detailed information of g18445.t1 in Acropora digitifera

Genomic Location: chr8Alt:24997920...25010604
NR annotation: XP_044179067.1, uncharacterized protein LOC114969736 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
Q8C6K9Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a6 PE=1 SV=2
P05099Matrilin-1 OS=Gallus gallus OX=9031 GN=MATN1 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00095
all species →
WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF00092
all species →
VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465
all species →
Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035
all species →
Domainvon Willebrand factor, type AInterproscan
IPR008197
all species →
DomainWAP-type 'four-disulfide core' domainInterproscan
IPR036645
all species →
Homologous_superfamilyElafin-like superfamilyInterproscan
IPR050525
all species →
FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020
all species →
COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005576
all species →
Cellular Componentextracellular regionInterproscan
GO:0030414
all species →
Molecular Functionpeptidase inhibitor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g18445.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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