Detailed information of g1852.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047130250.1, AP-1 complex subunit gamma-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O43747AP-1 complex subunit gamma-1 OS=Homo sapiens OX=9606 GN=AP1G1 PE=1 SV=5
P22892AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3
Q5R5M2AP-1 complex subunit gamma-1 OS=Pongo abelii OX=9601 GN=AP1G1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01602Adaptin_NAdaptin N terminal regionRepeatInterproscan
PF00013KH_1KH domainDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF00248Aldo_ket_redAldo/keto reductase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR050840FamilyAdaptor Complexes Large SubunitInterproscan
IPR002553DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR003029DomainS1 domainInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR004087DomainK Homology domainInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR020471FamilyAldo-keto reductaseInterproscan
IPR018170Conserved_siteAldo/keto reductase, conserved siteInterproscan
IPR036812Homologous_superfamilyNADP-dependent oxidoreductase domain superfamilyInterproscan
IPR023210DomainNADP-dependent oxidoreductase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONInterproscan
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan
PTHR438272,5-DIKETO-D-GLUCONIC ACID REDUCTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0030121Cellular ComponentAP-1 adaptor complexInterproscan
GO:0035615Molecular Functionclathrin adaptor activityInterproscan
GO:0140312Molecular Functioncargo adaptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

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