Gene detail

Detailed information of g18545.t1 in Acropora digitifera

Genomic Location: chr8Alt:26584597...26588293
NR annotation: XP_029200432.2, major facilitator superfamily domain-containing protein 6-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

chr8Alt.g18545.t1

TATGTAATGATACAATTTTAATTTCAATTTGGTTTCAATGACATTTTTTCAAGTTCACCTCGATCTCGCAGACACCTCATTCAAACGGCATTTTTTAAAGGATCACCGTACACCGCACACCGTGTCTGTATGCATATCTAGAGCTGGAAACATTAATGTTAAATTTCGCTGGAATTTTACAAGGATTTTAGTCTAGCTTTCACAACATAACCAAGATATAATTTAATTGAGCGCCTTTTTGTAGCAACAATTAATCAGGGAAGAATGGAAACCAAAACTGAAAACCCGACAGGGCAAGAAGTAAACGACGAGGGACAATGCGATGAAACCAACGCCAAAAAGACCACACAGTGGAAAAGTAACTGGAACTGTTTGTGTGAAGCAGATTATCTTGTATTCAAAGGATTTTGTTTCTTCATTTACGGAGCCTATGGTGGACTTATTCCCTTTCTTTCTCTGTATTTCAAGCAACTGTTTTTGGGACCAAGTTACGTAGGGATCATTGTCGGAATCCGGCCTCTCATTCAATGCATTGGAGCACCTTTTTGGGGAATCATAGCGGAGCGTTACCACGCAGGAAAAATCATTTTCCTCGGGAGTATTATTGCTTGGATCATCAAGGCGTTTGTTTTACTTTCAATTCGACCAAAAAGTCAATATTGTATCGAGGTGTACGAGAACAGAACAGCAAACTTGACATACGTGTATGCGTACGATTTGTGGAAGACTGAAGCCGAGGAAAAACCCGATTGGGTGGTCTTTCCAATTAGCAATCCTGTTCTTGTGGAGACAAACAAGATAGCAGTGATTGAGTCACTGAAGATGAAGAAACAAACACCCCAATATATTCCGCAAAAGGTGTTAACGAGAGCTGGTCCCGCAGATCTTGCGAGAGGGATCAAAATTGCAGAGAAGGACAAGAAGAGATTGAAACATCGAAGAGAAAATAGCAGCGCCACGAATGACGACAATAACTCAGCCGTCCATAGATCGTTATCGCAGGAAAAATCAGAAATAACGCCCCCTAACGAGAGTCTCAAAAAGCATGGAAGGAAGACGACAGATCTTGTAATCAAAGAGAGAAGAGATATAACTGACAAGATAACTGAAAGTTTGCGCTTTAAAATAGTGTACAAAGTTATTGTTGACAGCAAGGAAATGAACGCACCTGTCCAATTTATAACCGAAGTCGACAAGAATGAAATTGATTTTATGTTCGTTATGTTTATGATAATCATTATTATTGGGGAGTTTTTCGAATCGTCAACTTACACACTTTCTGATGCCTCTCTTCTGAAGCGGCTAGGGAAGGACAAAGAATATTACGGAAGAGTCCGTATGTGGGGTTCCCTGGGCTGGGCAGTCACGGCGTCCATGGTTGGACTTCTGGTAAATTCTTCGACATTCAAATTATGCGAAGTGGAGAAGCATAATTATGTAATCGCCTTTTACATTTTCATTGGATTTGTCGCAGCTGCCTTTGCCAATGCCCTCTGGTTTCGATTTAGTTACGAAGAAGAAATACAATTCGAGGACATTGGAAAGGTCGCGCCGATTCTCGCAAACTTTCGTCACTTATCTTATCTTCTCGCCACGTTGTACACCGGTTTTTGCTATGGCATCTTGGTTCACTTTATTAACTGGTTTATCGATGATCTTGGCGGCTCTAGTAGCATCATGGGGACTGCGGGCACCGCTAGAGAAATCACAGCTTTGGTCACATTTGGTCTTAGTGCGCATGCTCTAAAAGCGTTCGGAAATGTGAACGTAATGTTGCTTTGCCTGATGTCTTACATCATCTGTTTCATTTTGTATTCCATGCTCACGAATCCCTGGACGGCCATTGCGTTGGAGGTCTTAGATGGTGGTACCTATGGTCTTGTGTGGTCGACATGTGTCAATTACATGAGCAAAGTGGGTTCTAAACTTGGTGTTGTTGAAAGTACTCAAGGAATTCTTCAAGGAATTTTCTGGGGCCTTGGCAACGGAGGTGGCACAATTTTAAGCGGCGTTGTTATCGAGATATATGGCGTCGTAAGAACTTTTCGTTATTCTGCCCTTGCCGGGACAGTGGTTTTAGTTATTCTTGTGATTTCACAGATAATAGCAAGTTTTCTTGAAGAGAAAGACAAACGGAAACAAGAGTATCGCATTATATCAGATAGCGAGAAGTGATGGACGAAACCACGAATGACAAGTGTTGGCCGTGATTACAGATCCCAAATAATAGAGAATTAAATTGCGAATCAAGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CBH5	Major facilitator superfamily domain-containing protein 6 OS=Mus musculus OX=10090 GN=Mfsd6 PE=1 SV=1
A1DWM3	Major facilitator superfamily domain-containing protein 6 OS=Sus scrofa OX=9823 GN=MFSD6 PE=2 SV=1
Q1LUQ4	Major facilitator superfamily domain-containing protein 6-A OS=Danio rerio OX=7955 GN=mfsd6a PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12832 all species →	MFS_1_like	MFS_1 like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051717 all species →	Family	Major facilitator superfamily MFSD6	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR024989 all species →	Domain	Major facilitator superfamily associated domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16172 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g18545.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.