Gene detail

Detailed information of g18615.t1.1 in Blastomussa wellsi

Genomic Location: :...
NR annotation: XP_020615751.1, WW domain-containing adapter protein with coiled-coil-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

g18615.t1

ATGAGTAATAGGAAATATCCGAGGCTAGCGGACGGGTATCATGACCGGAGTCAGTATCATCCATATCAGgCAAGTGCGAAGTTCTCGTCGAAAAGTCATTCCAACTGCAATGCGGAGAATAGTAGTCGAGATCGAGAGAGGGAGAGATCACCGGTCGCTTCTTCAAACAGTCGAGGAAGTTCACCGTATTCCCGGTATTCAAACCATTCACCCCGTTCGCACCGATCGAAGTCCTACGGCCGATCTCGAGAGAGCAGCAAGAGAGGTTCTAGCAAGTCTCCAACTGATGCGCACAGCCATCTTACCCTTCCTAACAGTAATTCGCATGGCAGTGACCGCCACACCAAACCCAACCATGTTAACAGTGATGAGACTTTCATTTGGTCTCAGCACACCAGCTCTTCAGGAAAGGTGTACTATTACAACTGTAAAACAGAAAAGTCCCAGTGGGAGAAACCAAAGGAATGGATTGAACGTGAGAAAAGAGAGAAGGAGAGAAAGGACAAGGAAAAAAGAGATTTTGTGGGAAACAAAGATGGACGAGACATTAGAGGAGAATCCACTCTTCACCGAGAGCATCTGGCTCCCTCCAAGCCAAGCAAATACCTGTCCCCTTCAAAGAGTATTCACAGAGACTATCATAGCACTCTTGATAAACGAGATGGAATTCATACAGACTCTCGGAATTTGCTTGTGGATCAGAAAAAAGATATTCAGAGACTTAGTGAAGCTAGTGACAGAGGACCTCAGGTGGTCAAGACCTGTTCAGTGCACACAACAGCTCTTCCAACAGTTGTTTATAGGCCTAATTCTGTTGTGGCAAATTTTGGAGGAGAGACAGCGGTTTCACCAGCTGGAAGCTTGCAAGACGTTTCACCTCCGACCACTCCATCTTCTCGCCACAACATGTACGACCAGTCTTCGCACACTCCTTCACCAAATATAGTCACTGCAGTATCACCACAAGTTCCGTCACACCATGGAGTACCCTCCCCTCAACTTCAGTTTCCTCTTCAACAGTCACCCCAGTTTCCCTCCAGACATGGATTACCATTAGCCCAAAATTTATTCCCGCAGGTGCCAGTCACGGGTACTCCAAGAGCACCACAGCAATTCCCATTTGCCGCACACCAGTATGTTGTACCACAGCAAGCCCTTCAGCAAGTTCAGCCTCAAGTGAATGATTATAGACAGTACATTCATGTGAATAATAGTGGCCCACCTCTATCGCAAGTATCACAGCCAGTCAGTGCTGCACCATTATCCCTTGCAGCAGCCCCAGTTCAGTCACAGCAGCCAGTGGTGTTTAACAGGCAGGTCTCCCCTCAGCCTGTTCTTCATCCTCTTCAGCAAGCTACACTTGTGCTTCAGCAACGAAAGATGTCAGAGgCGCAAGCTGCTGCAGCTGCAGTTAACATTCAACAACCATATTCAGTAGCAACAGCGACCACAGCACTACCACCAACTGCAGGTCTCCCACAGCAAGCTGTATCACCTGTCACAGTTGGTTTACACCGGAAGGATGATAGGCCCCACCACAGCTCGCCTGGGTCACCAGTTGTATTTTCACAGCAGAAGTCATCACTGAATGAGCACACCCCACACCACTCGTCGCAGCAGCTTCCTCCCTTATCAGTAGCTTCCTCCAGTTTAGTGTCATCAAGTCCTCTTCCCCACTCCTCAAATTCTTCAAGTCCAATCAATGTTGCTCAACCTTCGGTTCCTACAGCTAACTTGCAGGCAATAGCAAAATATGTGGATAAAAATCTTACATCCCATTTGTCATCCTGGCCAACAGAAGCCGTAGACAGACAGATTCAGAAACTTTGGGAAGAAAGCAGTTGCTATTCAAATGACAGTGATAAAGCCAAAATAGAACAAATTCAGTTGCAGTCAGAGGCAGGTTTTATGGAAATGAGGCTAGAGACAGCAAGTAGAAGAATTTCATCGCTTAAAGGAATGACCAGAACTCTAGAAGCCCTCCTTGCTGAATCGGACGCTAAATTCTTGTCCTAG

Transcript

g18615.t1

Protein

Uniprot

Uniprot term	Description
Q5U4Q0	WW domain-containing adapter protein with coiled-coil OS=Xenopus tropicalis OX=8364 GN=wac PE=2 SV=1
Q7ZUK7	WW domain-containing adapter protein with coiled-coil OS=Danio rerio OX=7955 GN=waca PE=2 SV=1
Q9BTA9	WW domain-containing adapter protein with coiled-coil OS=Homo sapiens OX=9606 GN=WAC PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202	Domain	WW domain	Interproscan
IPR038867	Family	WW domain-containing adapter protein with coiled-coil	Interproscan
IPR036020	Homologous_superfamily	WW domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15911	WW DOMAIN-CONTAINING ADAPTER PROTEIN WITH COILED-COIL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000993	Molecular Function	RNA polymerase II complex binding	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0010506	Biological Process	regulation of autophagy	Interproscan
GO:1904263	Biological Process	positive regulation of TORC1 signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23884	WAC; WW domain-containing adapter protein with coiled-coil	-	Membrane trafficking	ko04131	deepkoala