Genomic Location: chr8Alt:27787551...27801832
NR annotation: XP_044178962.1, collagen alpha-1(I) chain-like isoform X11 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families
| CDS |
| g18630.t1 |
| Transcript |
| chr8Alt.g18630.t1 |
| Protein |
| chr8Alt.g18630.t1 |
| UniProt accession | Description |
|---|---|
| Q91717 | Collagen alpha-1(II) chain OS=Xenopus laevis OX=8355 GN=col2a1 PE=2 SV=2 |
| Q6P4Z2 | Collagen alpha-1(II) chain OS=Xenopus tropicalis OX=8364 GN=col2a1 PE=2 SV=1 |
| P02460 | Collagen alpha-1(II) chain (Fragment) OS=Gallus gallus OX=9031 GN=COL2A1 PE=2 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01410 all species → | COLFI | Fibrillar collagen C-terminal domain | Family | Interproscan |
| PF01391 all species → | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000885 all species → | Domain | Fibrillar collagen, C-terminal | Interproscan |
| IPR050149 all species → | Family | Collagen superfamily | Interproscan |
| IPR008160 all species → | Repeat | Collagen triple helix repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 all species → | COLLAGEN ALPHA | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005201 all species → | Molecular Function | extracellular matrix structural constituent | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0030020 all species → | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 all species → | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 all species → | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 all species → | Cellular Component | collagen-containing extracellular matrix | Interproscan |
g18630.t1.
