Gene detail

Detailed information of g18683.t1 in Montipora capitata

Genomic Location: Sc0000924:64432...88277
NR annotation: XP_044183833.1, eIF-2-alpha kinase GCN2-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g18683.t1

atgttttgctctactctttgctcatacgcaggtcaaggttcatctggggcacgtgtctgcaatgctatggatgtgactcttggtgagctggttgtggtttatgaatggagtttgtcgtcgcaacaaagtggaagtggagcgaagcatacgctattcaccaatgacaatcaacagcaggacttgcatgggagacttgttaaacaggtgtacagtattgaacaagagattgtgtccctcgtcaaccgcgtcagtcaccccaatttaacccactatttggctgtgaatgtccaggaatcaacaccatcagttaaaatccaggttttggtggagtatgttggtggtggagatctcagtcttcgtctcagaaatggtggtctgccattacaggagttacgggaatacacgcaacaacttgctgaggctttagcttatttacacgggaaacatgttgttcataaggaccttaggttgacaagttgtcttctcgactgtgatgggaatttaagactcgcagactacagcgttggtaaaaggttgtcggatctgtatcaagcttatggtatcaatgggaaagaagcacgtggtaatgcggccgaagaaagcaacaaatcatcttcgcgatatgggaaaccaggagatatatacagcctggggatgttgatcctttctctggccctgggcaaaataatcactggagatgtgaaagagataccaacatccttgccttctgagctacgagacttcctttcaaattgcttgaagacagatgaaaggaaccgaatgtccgcctctcagttgttgacccactccttcataacctctgttattacagccgggttatcaaactgcgaggaagcaattcagaataacggcatcgctgcaactgaccgggctttgtccccgatcgatcaaccggaacacgaggagccggtcccagacttctcctttttctccggtgtcccggggaagtcacgcgtaaagtgtgagttcgagcagctccagtttcttggaaaaggagggtttggcaatgtgataaaggtgcgaaacaaactcgataactgtttgtatgcggtcaagcgcattcctctaaaccccaaaagcacgcagtttaacaagagaatcacacgtgaagtgcagttaatttcccgtctaaatcacgaaaatgttgtcagatattacaactcctggatcgagagcgctgaggaacaagatggcagtaagacttcgacagacgacagcgaatccaagaatcagccgtcgactgtatcaaaggaggaaagtctcttaaagctcaataaaatagaggcaccaagtataagagaagacagggaaagttgtgaagattcctggtggcaggacgaaaaggaaccaagtaaaaatggatcggactcatcgtccagtggatcacaggtgtctgttcgcagcccacggaaaggccacagtatggcgttcttcagcagtaaatcggagtcttctgaaggaatcgtgttcaacgccgcgaacgttgacgagtcggttctccagtttggcgatctcatggacacagagtccgatgattcagacgaaggagaagagtggcaggagactggaagcgagtctaactctgaacacaaaggactgcagtatctctacattcagatggagtactgcgaaaaaagcacgttaaggaaccttatcgacgagggcttatacaaggaggaggagcgcgtctggaggctcattagagagatcgtcgaaggattggcccacattcatacacaggggatcattcatcgagatcttaagcccgtcaacttattcctagactcccagggtcgtatcaaaatcggtgactttggcctcgctaccacaaacagtattacgcgcggtggcatgggccctgaattgcaagatcaccacgacaattcccagtctcccaaaagcagctcgtccgccaaagaaagcgtgacaggtaaagttggtactactttgtatgtggctcctgaggtgggcaaacgaggcggcataaaggtcaagtacagccccaaggtggatctttacagcttgggaattatcttctttgagatgtgttttcggcccctcacaacctccatggaaagggttcaagttctaggaaacataagaacggagcgtataatctttcccaccgaatttgaccagaggcgtctcttcaaacaaactacagtcctaaaatggttattaaaacacaacccagaggaacgcccaacctcgcaggaactgctgcaaagtcaatacatcccacccaagattgaagacggccagctggatgaagttctgaaacacacgctagcgtccacaaactctacgcgctaccagcgcctcataaaacacgtattttcgcaacacgtttcctccgttcgtgacgtaacttacgattttgatgttttcacgggacaggtgtttccaaagctaattctcgcccgacagatggttcatgaaagcgtgaagtctgtgttcttgcggcatggcgcgttgcgtgtcaggacatcgcacctcgcgccgcgcacaaagctttttgaacaattagaatatgcggtgagtctcatggaccatagtggagcgcttgtcacgctgccgtacgatttgagaattccctttgcgcgctatgtcgcacggacgggagtcgtccagatgaagaggtttgacattggctgcgtttatcgtgttaaccgcattctgggcgcccatccgaaggaactctacgagtgtgtgttcgacatcgtcacgagcacgcccgaagaccttgttcccgatgccgaagtccttctcgtggtcgcagagatcattaagcagtttccgtctctcgacaatcggagttactacatcaggataaaccacactgggatcatgagatcatttttgacctctattggcatctctgatgaaagacaatcggagttgatctcgattcttgaagaaactcgcggcgaaaaagaaagaaacgatcagatcggttcgtttgtggagaatttacaaaccagtgagcacactggtatggctctgtgcgattttctgaagtttcaaggacccgtgagtgaactgcgccagcatttgattaggaccatgaagcgaaaatcatggatcgggcaaagcgcccggcaagcttacggagatcttcagaaaattatcacgcacgccgaaacatttggcataagtttaccacttgttgtcaacacctccatggtttacaactttcaacatttctctggactgattttccagtttgtagccacgaacaaccggaagcggaaacgaggaggggtcgatattttcgctgcaggtggaaggtatgataagctgataagtcagtttcggcgcggagcggatgcttcgtttgcttcccccggcggagttggtgtcagtattgccattgagaaaatagtgtctgcagttgtggaagatgaatatgcctttgtaccctgcgcctacgatgttttcgtctgttcagcgggtcacaatcccatgcaacaagagcgcatgcgcattgcgcgtgatttgtggaatgtaggcatcaaggctacaatttcttatggcgcgatgccactggaagagctacaggagatttgtaaaaaagaagcaattcaacacatggtggttttgaaagagcaagagcctgattatgctagggttcgttctttagacaaagagaagatctccgagtcccgtgttcagataaatgaccttgtggaccatcttcaaggtaaactctcgagcaagcctgaagccaccgagtcctccgcgcccgttagcaacaagggccaaggaacacagagcggtaatgaactaaattcgtctattgtgcccgagataaaggtttcgttcaacacacaggaaaggatggcatggaatataaagaaacgatacgagagcttgatgatgtcgaagataaagcctctcttagcccacattggtactaaaaatgcagttgaagtaataggggttgacttgcctggctccgtgttgcgaagtatatcagccattcttgatctcgacgccaacaaagatgctttcgactccagtgttgcgacaatttcagataagaatcctcgctacaagaaatacatcggccgtttatgcgacgaaatcagagaccttaaagtttacaagaaagtccccatgatatttgtgtacagcgtgaaggacgaaattttcaaaatgtttttctag

Transcript

g18683.t1

ATGTTTTGCTCTACTCTTTGCTCATACGCAGGTCAAGGTTCATCTGGGGCACGTGTCTGCAATGCTATGGATGTGACTCTTGGTGAGCTGGTTGTGGTTTATGAATGGAGTTTGTCGTCGCAACAAAGTGGAAGTGGAGCGAAGCATACGCTATTCACCAATGACAATCAACAGCAGGACTTGCATGGGAGACTTGTTAAACAGGTGTACAGTATTGAACAAGAGATTGTGTCCCTCGTCAACCGCGTCAGTCACCCCAATTTAACCCACTATTTGGCTGTGAATGTCCAGGAATCAACACCATCAGTTAAAATCCAGgTTTTGGTGGAGTATGTTGGTGGTGGAGATCTCAGTCTTCGTCTCAGAAATGGTGGTCTGCCATTACAGGAGTTACGGGAATACACGCAACAACTTGCTGAGGCTTTAGCTTATTTACACGGGAAACATGTTGTTCATAAGGACCTTAGGTTGACAAGTTGTCTTCTCGACTGTGATGGGAATTTAAGACTCGCAGACTACAGCGTTGGTAAAAGGTTGTCGGATCTGTATCAAGCTTATGGTATCAATGGGAAAGAAGCACGTGGTAATGCGGCCGAAGAAAGCAACAAATCATCTTCGCGATATGGGAAACCAGGAGATATATACAGCCTGGGGATGTTGATCCTTTCTCTGGCCCTGGGCAAAATAATCACTGGAGATGTGAAAGAGATACCAACATCCTTGCCTTCTGAGCTACGAGACTTCCTTTCAAATTGCTTGAAGACAGATGAAAGGAACCGAATGTCCGCCTCTCAGTTGTTGACCCACTCCTTCATAACCTCTGTTATTACAGCCGGGTTATCAAACTGCGAGGAAGCAATTCAGAATAACGGCATCGCTGCAACTGACCGGGCTTTGTCCCCGATCGATCAACCGGAACACGAGGAGCCGGTCCCAGACTTCTCCTTTTTCTCCGGTGTCCCGGGGAAGTCACGCGTAAAGTGTGAGTTCGAGCAGCTCCAGTTTCTTGGAAAAGGAGGGTTTGGCAATGTGATAAAGGTGCGAAACAAACTCGATAACTGTTTGTATGCGGTCAAGCGCATTCCTCTAAACCCCAAAAGCACGCAGTTTAACAAGAGAATCACACGTGAAGTGCAGTTAATTTCCCGTCTAAATCACGAAAATGTTGTCAGATATTACAACTCCTGGATCGAGAGCGCTGAGGAACAAGATGGCAGTAAGACTTCGACAGACGACAGCGAATCCAAGAATCAGCCGTCGACTGTATCAAAGGAGGAAAGTCTCTTAAAGCTCAATAAAATAGAGGCACCAAGTATAAGAGAAGACAGGGAAAGTTGTGAAGATTCCTGGTGGCAGGACGAAAAGGAACCAAGTAAAAATGGATCGGACTCATCGTCCAGTGGATCACAGGTGTCTGTTCGCAGCCCACGGAAAGGCCACAGTATGGCGTTCTTCAGCAGTAAATCGGAGTCTTCTGAAGGAATCGTGTTCAACGCCGCGAACGTTGACGAGTCGGTTCTCCAGTTTGGCGATCTCATGGACACAGAGTCCGATGATTCAGACGAAGGAGAAGAGTGGCAGGAGACTGGAAGCGAGTCTAACTCTGAACACAAAGGACTGCAGTATCTCTACATTCAGATGGAGTACTGCGAAAAAAGCACGTTAAGGAACCTTATCGACGAGGGCTTATACAAGGAGGAGGAGCGCGTCTGGAGGCTCATTAGAGAGATCGTCGAAGGATTGGCCCACATTCATACACAGGGGATCATTCATCGAGATCTTAAGCCCGTCAACTTATTCCTAGACTCCCAGGGTCGTATCAAAATCGGTGACTTTGGCCTCGCTACCACAAACAGTATTACGCGCGGTGGCATGGGCCCTGAATTGCAAGATCACCACGACAATTCCCAGTCTCCCAAAAGCAGCTCGTCCGCCAAAGAAAGCGTGACAGGTAAAGTTGGTACTACTTTGTATGTGGCTCCTGAGGTGGGCAAACGAGGCGGCATAAAGGTCAAGTACAGCCCCAAGGTGGATCTTTACAGCTTGGGAATTATCTTCTTTGAGATGTGTTTTCGGCCCCTCACAACCTCCATGGAAAGGGTTCAAGTTCTAGGAAACATAAGAACGgAGCGTATAATCTTTCCCACCGAATTTGACCAGAGGCGTCTCTTCAAACAAACTACAGTCCTAAAATGGTTATTAAAACACAACCCAGAGGAACGCCCAACCTCGCAGGAACTGCTGCAAAGTCAATACATCCCACCCAAGATTGAAGACGGCCAGCTGGATGAAGTTCTGAAACACACGCTAGCGTCCACAAACTCTACGCGCTACCAGCGCCTCATAAAACACGTATTTTCGCAACACGTTTCCTCCGTTCGTGACGTAACTTACGATTTTGATGTTTTCACGGGACAGGTGTTTCCAAAGCTAATTCTCGCCCGACAGATGGTTCATGAAAGCGTGAAGTCTGTGTTCTTGCGGCATGGCGCGTTGCGTGTCAGGACATCGCACCTCGCGCCGCGCACAAAGCTTTTTGAACAATTAGAATATGCGGTGAGTCTCATGGACCATAGTGGAGCGCTTGTCACGCTGCCGTACGATTTGAGAATTCCCTTTGCGCGCTATGTCGCACGGACGGGAGTCGTCCAGATGAAGAGGTTTGACATTGGCTGCGTTTATCGTGTTAACCGCATTCTGGGCGCCCATCCGAAGGAACTCTACGAGTGTGTGTTCGACATCGTCACGAGCACGCCCGAAGACCTTGTTCCCGATGCCGAAGTCCTTCTCGTGGTCGCAGAGATCATTAAGCAGTTTCCGTCTCTCGACAATCGGAGTTACTACATCAGGATAAACCACACTGGGATCatgagatcatttttgaccTCTATTGGCATCTCTGATGAAAGACAATCGGAGTTGATCTCGATTCTTGAAGAAACTCGCggcgaaaaagaaagaaacgatCAGATCGGTTCGTTTGTGGAGAATTTACAAACCAGTGAGCACACTGGTATGGCTCTGTGCGATTTTCTGAAGTTTCAAGGACCCGTGAGTGAACTGCGCCAGCATTTGATTAGGACCATGAAGCGAAAATCATGGATCGGGCAAAGCGCCCGGCAAGCTTACGGAGATCTTCAGAAAATTATCACGCACGCCGAAACATTTGGCATAAGTTTACCACTTGTTGTCAACACCTCCATGGTTTACAACTTTCAACATTTCTCTGGACTGATTTTCCAGTTTGTAGCCACGAACAACCGGAAGCGGAAACGAGGAGGGGTCGATATTTTCGCTGCAGGTGGAAGGTATGATAAGCTGATAAGTCAGTTTCGGCGCGGAGCGGATGCTTCGTTTGCTTCCCCCGGCGGAGTTGGTGTCAGTATTGCCATTGAGAAAATAGTGTCTGCAGTTGTGGAAGATGAATATGCCTTTGTACCCTGCGCCTACGATGTTTTCGTCTGTTCAGCGGGTCACAATCCCATGCAACAAGAGCGCATGCGCATTGCGCGTGATTTGTGGAATGTAGGCATCAAGGCTACAATTTCTTATGGCGCGATGCCACTGGAAGAGCTACAGGAGATTTGTAAAAAAGAAGCAATTCAACACATGGTGGTTTTGAAAGAGCAAGAGCCTGATTATGCTAGGGTTCGTTCTTTAGACAAAGAGAAGATCTCCGAGTCCCGTGTTCAGATAAATGACCTTGTGGACCATCTTCAAGGTAAACTCTCGAGCAAGCCTGAAGCCACCGAGTCCTCCGCGCCCGTTAGCAACAAGGGCCAAGGAACACAGAGCGGTAATGAACTAAATTCGTCTATTGTGCCCGAGATAAAGGTTTCGTTCAACACACAGGAAAGGATGGCATGGAATATAAAGAAACGATACGAGAGCTTGATGATGTCGAAGATAAAGCCTCTCTTAGCCCACATTGGTACTAAAAATGCAGTTGAAGTAATAGGGGTTGACTTGCCTGGCTCCGTGTTGCGAAGTATATCAGCCATTCTTGATCTCGACGCCAACAAAGATGCTTTCGACTCCAGTGTTGCGACAATTTCAGATAAGAATCCTCGCTACAAGAAATACATCGGCCGTTTATGCGACGAAATCAGAGACCTTAAAGTTTACAAGAAAGTCCCCATGATATTTGTGTACAGCGTGAAGGACgaaattttcaaaatgtttttctag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9P2K8	eIF-2-alpha kinase GCN2 OS=Homo sapiens OX=9606 GN=EIF2AK4 PE=1 SV=3
Q9QZ05	eIF-2-alpha kinase GCN2 OS=Mus musculus OX=10090 GN=Eif2ak4 PE=1 SV=2
D4A7V9	eIF-2-alpha kinase GCN2 OS=Rattus norvegicus OX=10116 GN=Eif2ak4 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002771 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF13393 all species →	tRNA-synt_His	Histidyl-tRNA synthetase	Domain	Interproscan
PF12745 all species →	HGTP_anticodon2	Anticodon binding domain of tRNAs	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036621 all species →	Homologous_superfamily	Anticodon-binding domain superfamily	Interproscan
IPR045864 all species →	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR016255 all species →	Family	eIF-2-alpha kinase Gcn2	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR041715 all species →	Domain	Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR024435 all species →	Domain	Histidyl tRNA synthetase-related domain	Interproscan
IPR050339 all species →	Family	Cell Cycle and Stress Response Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11042 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0000077 all species →	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0004694 all species →	Molecular Function	eukaryotic translation initiation factor 2alpha kinase activity	Interproscan
GO:0010998 all species →	Biological Process	regulation of translational initiation by eIF2 alpha phosphorylation	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16196	EIF2AK4; eukaryotic translation initiation factor 2-alpha kinase 4	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g18683.t1 across 48 RNA-seq samples of Montipora capitata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

3Conditions

33.9Max TPM

12.7Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole organisms · ambient pH treatment	21	21	14.04	33.85
whole organisms · low pH treatment	15	15	10.88	24.25
whole organisms · extra low pH treatment pH treatment	12	12	12.50	27.97

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR11452230	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	33.85
SRR11452222	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	30.25
SRR11452228	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	27.78
SRR11452232	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	21.81
SRR11452233	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	21.18
SRR11452234	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	20.70
SRR11452251	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	18.51
SRR11452231	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	18.42
SRR11452217	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	14.09
SRR11452263	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	14.01
SRR11452240	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	12.47
SRR11452246	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	11.04
SRR11452262	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	10.93
SRR11452252	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	10.28
SRR11452250	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	9.12
SRR11452237	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	4.28
SRR11452243	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	4.08
SRR11452254	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	3.60
SRR11452242	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	3.28
SRR11452259	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	2.64
SRR11452260	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	2.61
SRR11452224	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	24.25
SRR11452223	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	23.45
SRR11452221	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	20.51
SRR11452229	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	16.02
SRR11452218	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	14.82
SRR11452245	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	12.45
SRR11452216	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	11.51
SRR11452247	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	9.31
SRR11452249	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	8.09
SRR11452255	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	5.20
SRR11452236	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	4.08
SRR11452238	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	4.05
SRR11452241	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	3.97
SRR11452258	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	3.00
SRR11452253	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	2.47
SRR11452225	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	27.97
SRR11452227	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	23.85
SRR11452226	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	23.62
SRR11452219	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	16.67
SRR11452261	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	15.50
SRR11452220	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	12.19
SRR11452248	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	10.09
SRR11452244	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	6.61
SRR11452235	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	4.03
SRR11452239	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	3.77
SRR11452257	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	3.05
SRR11452256	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	2.64

Source: CnidoSite RNA-seq expression matrices (MCAPI_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.