Gene detail

Detailed information of g1889.t1 in Tripedalia maipoensis

Genomic Location: scaffold_10:26440365...26446632
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02536 all species →	mTERF	mTERF	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038538 all species →	Homologous_superfamily	MTERF superfamily, mitochondrial/chloroplastic	Interproscan
IPR003690 all species →	Family	Transcription termination factor, mitochondrial/chloroplastic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13068 all species →	CGI-12 PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003690 all species →	Molecular Function	double-stranded DNA binding	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006390 all species →	Biological Process	mitochondrial transcription	Interproscan
GO:0061668 all species →	Biological Process	mitochondrial ribosome assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15031	MTERF; mitochondrial transcription termination factor family protein	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.