Gene detail

Detailed information of g190.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_048252863.1, centlein-like isoform X4 [Haliotis rufescens]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A2AM05	Centlein OS=Mus musculus OX=10090 GN=Cntln PE=1 SV=1
Q9NXG0	Centlein OS=Homo sapiens OX=9606 GN=CNTLN PE=1 SV=6
Q6DDB9	RNA-binding protein PNO1 OS=Xenopus tropicalis OX=8364 GN=pno1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02843	GARS_C	Phosphoribosylglycinamide synthetase, C domain	Domain	Interproscan
PF02844	GARS_N	Phosphoribosylglycinamide synthetase, N domain	Domain	Interproscan
PF01071	GARS_A	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	Domain	Interproscan
PF03712	Cu2_monoox_C	Copper type II ascorbate-dependent monooxygenase, C-terminal domain	Domain	Interproscan
PF03351	DOMON	DOMON domain	Domain	Interproscan
PF01082	Cu2_monooxygen	Copper type II ascorbate-dependent monooxygenase, N-terminal domain	Domain	Interproscan
PF01786	AOX	Alternative oxidase	Family	Interproscan
PF05380	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan
PF05346	DUF747	Eukaryotic membrane protein family	Family	Interproscan
PF15006	DUF4517	Domain of unknown function (DUF4517)	Family	Interproscan
PF13649	Methyltransf_25	Methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038810	Family	Centlein	Interproscan
IPR000115	Family	Phosphoribosylglycinamide synthetase	Interproscan
IPR011054	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR020559	Conserved_site	Phosphoribosylglycinamide synthetase, conserved site	Interproscan
IPR016185	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR020560	Domain	Phosphoribosylglycinamide synthetase, C-domain	Interproscan
IPR020562	Domain	Phosphoribosylglycinamide synthetase, N-terminal	Interproscan
IPR020561	Domain	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR037123	Homologous_superfamily	Phosphoribosylglycinamide synthetase, C-domain superfamily	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR008977	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan
IPR024548	Domain	Copper type II ascorbate-dependent monooxygenase, C-terminal	Interproscan
IPR045266	Domain	Copper-dependent monooxygenases, DOMON domain	Interproscan
IPR036939	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily	Interproscan
IPR005018	Domain	DOMON domain	Interproscan
IPR000323	Domain	Copper type II, ascorbate-dependent monooxygenase, N-terminal	Interproscan
IPR014784	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase-like, C-terminal	Interproscan
IPR000945	Family	Dopamine beta-hydroxylase-like	Interproscan
IPR038659	Homologous_superfamily	Alternative oxidase superfamily	Interproscan
IPR002680	Family	Alternative oxidase	Interproscan
IPR008042	Family	Retrotransposon, Pao	Interproscan
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR008010	Family	Tapt1 family	Interproscan
IPR026794	Family	Adipose-secreted signaling protein	Interproscan
IPR041698	Domain	Methyltransferase domain 25	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18957	CENTLEIN	Interproscan
PTHR43472	PHOSPHORIBOSYLAMINE--GLYCINE LIGASE	Interproscan
PTHR46788	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 5	Interproscan
PTHR10157	DOPAMINE BETA HYDROXYLASE RELATED	Interproscan
PTHR31803	ALTERNATIVE OXIDASE	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR12826	RIBONUCLEASE Y	Interproscan
PTHR13317	UNCHARACTERIZED	Interproscan
PTHR13287	UNCHARACTERIZED	Interproscan
PTHR43591	METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005814	Cellular Component	centriole	Interproscan
GO:0010457	Biological Process	centriole-centriole cohesion	Interproscan
GO:0033365	Biological Process	protein localization to organelle	Interproscan
GO:0004637	Molecular Function	phosphoribosylamine-glycine ligase activity	Interproscan
GO:0009113	Biological Process	purine nucleobase biosynthetic process	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0016715	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0004500	Molecular Function	dopamine beta-monooxygenase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0009916	Molecular Function	alternative oxidase activity	Interproscan
GO:0010230	Biological Process	alternative respiration	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0036064	Cellular Component	ciliary basal body	Interproscan
GO:0045724	Biological Process	positive regulation of cilium assembly	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24419	METTL27; methyltransferase-like protein 27	EC:2.1.1.-	Proteasome	ko03051	deepkoala
			Purine metabolism	ko00230	deepkoala
			Enzymes with EC numbers	-	deepkoala