Gene detail

Detailed information of g1904.t2 in Acropora digitifera

Genomic Location: chr1Alt:31903333...31970894
NR annotation: XP_029186888.2, sortilin-related receptor-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g1904.t2

ATGAAGAGAGGCGTGCAGGAAATAAGGTTGCTTTTAACCTTTTTCTTGTTCTCAACGTTTGGAATATCAAAGCTAGATGCCATCAAGAAACCCAGAGAGAGGCATTTATTTGTTCAAAGGCGATCGCCACTGCCAGGTTCTCCAACTAAGCTCCAAACAGTTGAAAGAGAAAGCGTCGACAACGTTGGTTCTAATGAAGAACAAGATCCTCATAAAATCCTATCCAGGGTTCGACGATCAGTAAATCCGGATCTATCACCTAGAGTGAAAGAGTTCAAGCTGAATGACAGTCACTACCTGGCATATGTCCACTGGGCAGGGGACCACAGGGATACCATTGTTCTTTTGACACGAGATTTCACACCCAATTTGCACAGCAATAGTCATGTGTGGGTCTCTAAGGACTATGGGCAAAGCTTCACCAACCTTACGCACATGTTCAGGATACCTGGTCGCAGCAATGCTTACGCTCGAGTGGACATGTTTTATTCATCTCCTGTGGACAAGAGCAGGTACCTTTTGGTCGACACTCTGCACAACTTGATGTTCAGCACAATTGATGACTTTGCAACAGTTATCACAGTTTCCCTTTCTTTTTCACCGGATGAAATCCTCTACCATCCGAGCAGTAGTAATGTTGTTTTGGCCTATGATGAGTCAGCATCCAAGCTTTACTACTCCACAGACTTTGGTTTCAGATGGACTTTGAAGGAGGAGAATGTGCGTTCATATTATTGGGGTATACCACCATGGGACAATGCTAACACACTTTACATTGAGCGTGAAGAAATTTCAGGTGGCCTTTCCAATATTGTCAAAACAGACTATTTCTCAACCTTGGCGACAAGTGTCATTGAGAAAGTGCATGAATTCAATATTATCGACAACTACATGTTCGCTTTATTGCCGCAATCTGGATCTGACTCCATGACTTTGAAGGTGTCTCTGAATCGTTCATCATTCCATTCTGCACAGATTCCAACAAGTAATCCAACAAGGGATTTCTTCATTGCGGATGCATCAGAAAACCAGGTTTTCCTGGCTGTCGCTCACAGTGCCAGCACAACTCACCTGTACATTTCAGACACTACTGGGATTAAGTACAGCTTGTCCTTGGAAAGGGTGCTTTATTTCTCACACAACACATCTTCTCCATGGCTGAGGCGATACATACATGACAGATTTGTTGACCTGCACAAAGTTGACGGACTCCGAGGGGTGTACATTGCTAGTCAGCTCACTGTGGGAACTATTGGACGAAGGCACATCTTGTCAAAGATAACATTTGACAAGGGTGGGGTGTGGCAATCAATTGCAGCTCCTAAGACGGACAATAATGGAAGGCCTTTGAATTGTAATCTACCAAACTGCTCACTGCACCTTTCACAAAAATTTGGCTCATACTACCGCTACACTCGTTTCACTCCCATGAGATCCTGGAAGGAAGCCCCTGGTGTCATCATGGCGACAGGTTCTTATGGTGTGAGTTTGCGGAGAAATGCCGATATTTTCCTTTCTGCTGATGGTGGGCTGAGCTGGCATATGATATTACATGCTCCCTGGTGGTGGTATAATGTTGGTGATCATGGTGGAATTTTCATTGCTGTTCCAAGATCCAGACTCACAAACCTGATTTTTTATAGCTGGAATGAAGGCGAAACATGGTCAACGTACAAATTCCTGAACAACTCAAGAATGTATGTGTATGGTTTACTGACGGAACAAGGAGAGAAAAGTGCAGAATTCACCATATTTGGCTCCTATCGTGGTTTGCATAAGTGGGTGGTTGTGCAAATTGATCTTAAAAAAGTGTTGGGAGCACCATGTAGAGATGAGGATTACAAACGTTGGGTTCCATCAGATGAACAAAATGGCACTTGTCTTTTGGGAAGGAAGATGAGTTATGAGCGTCGAATTGCTCATGCTCATTGCTACAATGGATACGACTATGATCGGCCACTCTTACAAGAAAATTGTCCGTGCGACAGGGAGGACTTTCAATGTGACGAAGGCTATATGGCGTTTTTTAATAACGATTGCATATGGTCAAGCATCGTGCCTCCTACTAGATATCCTCCAACTTGCAGACCGGGCCAGACATATCTGCGAACAAAAGGATATCGTAGAGTTCCTGGAGACACATGTCAGGGTGGCATGGAAGATCGGTATGCCGCTGAGACGGCATCTTGTCCAATAAGTGGGCTGCCTGCTTTCTTGTTGTATGCTGCACGTACGTACATCAAGAGAATCACACTTGGAGATCACGTGGAAACTACAATTCCTCTTGGTGGTAGGCTGAGAAATGCCATTGCCTTAGACTACGACTACCAACAAAACTGCATTTACTGGGCTGATATCACATTGGACACCATAAAGAGGTCCTTCCTGAATGGATCTGGGATTATTGAGACGCTTCACAGTGGTATCCAGCAAGTGGAAGGGCTGGCATTGGATTGGCTTGGCGATAACATTTACTGGGTGGACGCTGTTGGAAAGAAGATAGAGGTGTCTAGGGCAGATGGACGATTCCGGAAGAGTCTGATTAGCTCTAATCTTGATCGCCCCAGAGCCATTGTTCTAGATCCCAAAAGGGGGTACATGTATTGGACCGACTGGGGAAGCAGTGCTCGCATTGAGAGAGCCTTCATGTCTGGTACAGGTCGAAGGTCAATTATCTCGACCTCTTTGCAGTGGCCCAATGGTCTTGCCATTGATTTTAGGCAGTTAAAACTTTATTGGACCGATGCTGGTTATGACAAAATCGAGAGAAGCAACTTGGATGGCAGCTATCGCCGGACAATCACCAGAACAGGCTTACCACACCCGTACTCAATATCAATCTATGAAGAGTCCATGTACTGGGATGACTGGTCCACGCTTTCTATACAGAAGGCAAACAAACGAGATGGTGGATCTCGGCAAACCATCAAATCGCACATACGTGGTCTCATGGATGTCAAAATTTTCCACCAGGATGTGCAAACTGGTAACAACAGTTGCTCCAGGCTAAAACCTTGTTCGCACCTCTGTTTGGCTGTGGGCAATGGATTTTCTTGTTCCTGCCCTGATAACATGGTTTCGGTGATATCTGCTGCTGGGATTGTGAGATGTGAATGCTCTCCTGGAGAACACATGGATCCCGTTACCAAGGAATGCAAAACAACGTCTGGCACGTGTAAAACAAACGAGTTCAAGTGTACGAATGGGGCCTGCGTCCCTTCTCACTGGAGGTGCGATCACGACAATGATTGCGGAGACAACTCTGATGAGCAAAATTGCCCTCACACGACGTGTCAATCAGATCAATTCAGATGCGATAATGGCCGTTGTATTTCCGCCTCTTGGAGGTGTGATCATGATAATGATTGCCATGATAACTCGGACGAGAGAAATTGCTCGTATGCTACATGTGGGGCAAACCATTTCACTTGTGCTAACAGACGTTGTATTCCGAGGTCATGGGTGTGTGACTTTGAAAATGACTGTGGTGATAACTCAGATGAAAGAGGCTGCACTCCAGCTCCTACTACCACGCGCCCGTCTTCTAATTGCTCAAGCTCTCAGTTTTCTTGTCATAATGGCCGCTGCATTCCCAGTCGATGGTTCTGTGATGGCGACAACGATTGTGGAGATAGAAGCGATGAACCATCTCGTTGCAGATCTACAAGAACTTGTTCATCCACACAGTTTACGTGTAGTAATGGCCATTGCATTCCAGCATCATGGCGCTGTGATGGTGACAATGACTGCGGTGACTACTCTGACGAAAGGGGCTGTTCATATACCACTCGACCCACTCCCTCCACCGCACCTTGGACTCGGAGAACAAGCTGTGGATCCTATGAATACACCTGCAACAATGGTTACTGTGTTTACTCTTGGGATGTGTGTGATGGAACGGACGATTGTGGCGACTATTCAGATGAGCTCTATTGCGGAACAACAGCTGCCCCAAGCATGACGCCATATACTCGAAGGGCATGCCATTTCTGGGAGTTCGCTTGTTCCAATGGAAGATGTATCAGTTGGAGGTTGAGATGCAACGGATACGCTAATTGTGGCGACGGCAGCGACGAAGTAGGATGCGCTGCCTCTATGATGTCAACAACTCCCGCAACAACACTGCCGCCAAGATGCCCTTCTGGGTGGCTTCGGTGCTCAAACGATCCTTCCAAGATCTGCATCAGAGCTTCCTGGTTGTGTGATGGAATTAGAAATTGCCCTAACGGATGGGACGAGTTGCCAGGGAACTGCGGCCGCCGTACAACATCAAGACCCTTTTGTTCAAGCAGTGAATACCAGTGTGCCTATGGCGGCTGTGTTCTGCGCTCTTCAGTATGCGACGGAATCAGCGAGTGCTACGATGGATCGGACGAAGTTGGCTGTGCTACCCCAAGCCCGTGCACTGGATTCACTTGTGACAGAAACCTTTGTTTATCGCGTTCGAGAATTTGCGATGGTATACATGACTGTCAGGATGGCGCTGATGAAAAGCATTGCGGCGATAGTTTGAAAGTTAAAATTGTCAGTGTAACAAGCATTAACTCCACAAGTGTCACTGTTCAATGGAATCCGATTACCGTACATCCAGCGAACGTCACCTTCCCAGGATACCGTGTTTCCCACAGGTCTGTCTCTCTTCACCATGTACATGATGTTGGAGCGTGGCAGTCGTTTCATACAGGCTTCGTTACCTCTACGATTGTGTCTGGCCTTCAGCCCTGCTCAGTATATGAATTCAGAGTGCAAGTGTTGCTTCAGGGGTTACCGCCAGGGCCTTATTCCGATGTAGTTCCGAAAGGAACCCCGACTTCTGCCGTTACAGCCTCTGCCCCAAGAAACGTGCAACATGTATTGAAAGGACGGGACTCCGTTCTGTTGACATGGGAAGCGCCAGCAACTTACTGCTCCGTCATCACTAACTACAAGGTTCTGTACACGAGGCACGGCCTGGGTAGTTTTACGTCTGTGGAAGTTGGTAACGTTCTGTTTTATCGACTAGGACTCAGTGGGGGACACACATATGATATCAAGGTTAAAGCTCACAGCGCAGAAGGTGACGGAGCGGCGTCAGCGGTTCAAACTGTAAAGATTTCGACCGACCCTCCTTCATTGCCTGTTTCAAACTTGCAACAATCGACAGGCAATGAAACCTCGGTCAGTCTGTCCTGGGGACCTCCAAAAGACAGCTCTGGTGCAGTCGTTCCTGTATCGGGATATTTGATTTACCAAAATGATGTCGGGCTAATTGGCAACACCAGCAATCACAACTTCACTGTCACTGCTCTGAGGTCCATGACGAAATATACTTTCACTGTGAAACCTTATAATTCCGCTGGAGTTGGGCCTCCGTATATTATCGAAGTCACGACTACAGGGGTTAGTGCTCCCACAAATGTTGTTGCGAAACCTTACAACCGCACGGTAGTGTCTTTGTCATGGTCGCCGCCTCAGCATGCCTCTCAAGCACAGAGCAACTATTACTACATCTTCTATGGAACGGTGAGGAGTGGAGTTAGTGCCGTGGCCGTAGGACGCACCTCAGAGAGAACTTATATGGTGGCAAATTTACATCCCGACATCGATTACCTGTTCGAAGTGTCTCTTGGTACTTCAGGGCCCCATAGTCGCCCAGTCAGTTCTCGCACCAAAACAGATATCGCCCATCCACCGGTACACAGTTTAATGGCGACAATTGCTAATGTCACGACTGTTCATCTTGCTTGGCAAAATACAATCAGTAGCACTCCAGTTCTGAATTATAAGATAAAGTATGAACACAAGGAAGGATCAACGTCATATTCGGTAACTGTAACGTCCTCCCAAACCCAGTACACTATCAAGTACCTCATGTTTAACACCACTTACACCTTTGAAGTGAGGACAGTGTTCAAGGACAATAGGCTCTCTGATGCTGTGTCAATTCAAAAGACAATTGGTCCCTTCTCTGCCCCCGTGGGTCCGCTGAAAACCATGGTCCATGCGGATTCCTCAGTCACACTGTCTTGGTCAGCGCCACCGACCATCGACCCAAGAAAATTAGCAGTGACTTATAAAGTATACTGGAATTGCTCGCAATGCCACAATGATTGGTATAACGCAAGAGGTTCGACTTCCACTCATGAAACCAAATACACGTTCTCATGGCTTCAGAGAGGTTTATATGTATTCAGTGTCCATGCCCATACTCGCCTGGGTATTGGAAAGAACGCCAGTGTCTCCTTGGAATATAGCGAGAACTACGGGCAAGTGAAAGACTTGACAGCAACTGTTGGAAGCGATTACACCATAACTGTTCAGTGGAAACCGCCCCCGAACATCGACCCGAAAGAAATAACGAGCTATGCCATTTCGTACAGTAATTACACCACGTATGATAGATACAGCTATTACCGTCCTACGGAATCTGCCAATATCACTGGAAGTGAACATAAATTCAAGATTCATGGACTGGCGGGCTATATCTATACTATTTACGTCAGTGCTGTGACGATACACGGTGAAGGTTCCGTCGCAAACGTCAAAGCTTCAGTGCCACCGCTAACGAGGGTCAGAGTCTGGGGAGCGCATGTCTCCGTGGGCGGTAGATATGGGTTGCAATTGAACGTACAATGGAGAAGACCTTATTTATACGACGAAAATTGGGATGTGGAAGTGTCTTGGCATTGTATCAGGAGCGAAGATTCTAACTGTTGGTGGGGCTATTATAGTCGCTGGTCGACCAAGCGCGTAGGCAGTGCTAATTCGGTGACGGTCAATGCGACACATTATAATACCGCGTACCTTATCAATATTGTAGTCATCACATCTCAGGGCAGAGGTACACCCACTTCTCTGACGAAATATATTCCATCATTGAATGGAAAGCCTGGGAATTTCTCTTGCAATGTCCTGAATGGGAGCAGACAAGGCTATCTTGAGTGTCATTGGACGATGCCTCTTGATGTTAATCCCGCGAGCTATCCCGGAAAGGTCGCTCAAGTGTCCGTAGTGGTACCCTCCAATAGGCCGCCTGTTGACAATTTTATTGCAAAGCCTGATTCGCAAAGTAAGACACTGGTTCATTTGTCGTGGACCCCACCGTCAAATGTCACCGTTCAGTATTATGTGGTGATCACAACGTGTTCGTACTGTGATACCAGAAGAATGACTGTTCCTGGTTCACGCACAGGGTATTCCCTAATACTTCCTTGTGGTAATAGTTACACATTTTCCGTCAGGGCGGTAATCGAAGGCGTTACAGGTAAGGAAAGCACAGCTCACATTACTCTACCCTCTGATATTGGTGCAGTCACTGATCTGGCAGTGAATGTCATTTCTGTCAACAAAAGTCAGCAATTGGATCGTTTGGAGAAAGTCTTTGTCTTAACGTGGAATAAGCCCAAAGACGTCGACGCTTCTGACATCGAGTATTACGAAGTCAGCTTACGGGATGGTAATAAATCCATCAGATCAGTCCATACAAACGATAGAAAGTGGAAGGTGACATATAGCGATTGGCTTTCTGTGGTGACCAATCCAAACCTCAACTTTGTCGTTCGTTGTAAAGCAAAATCATGTTTTGGAGTCGTAAGCACTGTCTCTGAAACGGCTATTAACCCTCCGGCTCCATCAGCGCGTAAGCAAAGCCAAAAAGGTCCAGGTGTTGTGGTATGGGTCGTACCCGTTGCCCTCGTGGGCGTGATCTTAATAGCCATCATCGTCTTCTTCGTGATGAAGTCGCGCCGCCTTGAGCGCTCGATGTTCGCTCTCATGACCAGAAGGACTGTAGATGATGAGGGCGGAGTGACTTTCCATTCATCAGAAGACGAAGTGCCGTTGCTTTATCGCTTTTCCGATGATGAGCCGCTTATCAACGCCTAA

Transcript

chr1Alt.g1904.t2

TGACCTCGTGACGTCACTTCACGTGACTTGATAATTTCGTACCAGTATATCGCAAGTCTAGATGGTAAATTTTACAGATAATCGTCGAAAATGAAGAGAGGCGTGCAGGAAATAAGGTTGCTTTTAACCTTTTTCTTGTTCTCAACGTTTGGAATATCAAAGCTAGATGCCATCAAGAAACCCAGAGAGAGGCATTTATTTGTTCAAAGGCGATCGCCACTGCCAGGTTCTCCAACTAAGCTCCAAACAGTTGAAAGAGAAAGCGTCGACAACGTTGGTTCTAATGAAGAACAAGATCCTCATAAAATCCTATCCAGGGTTCGACGATCAGTAAATCCGGATCTATCACCTAGAGTGAAAGAGTTCAAGCTGAATGACAGTCACTACCTGGCATATGTCCACTGGGCAGGGGACCACAGGGATACCATTGTTCTTTTGACACGAGATTTCACACCCAATTTGCACAGCAATAGTCATGTGTGGGTCTCTAAGGACTATGGGCAAAGCTTCACCAACCTTACGCACATGTTCAGGATACCTGGTCGCAGCAATGCTTACGCTCGAGTGGACATGTTTTATTCATCTCCTGTGGACAAGAGCAGGTACCTTTTGGTCGACACTCTGCACAACTTGATGTTCAGCACAATTGATGACTTTGCAACAGTTATCACAGTTTCCCTTTCTTTTTCACCGGATGAAATCCTCTACCATCCGAGCAGTAGTAATGTTGTTTTGGCCTATGATGAGTCAGCATCCAAGCTTTACTACTCCACAGACTTTGGTTTCAGATGGACTTTGAAGGAGGAGAATGTGCGTTCATATTATTGGGGTATACCACCATGGGACAATGCTAACACACTTTACATTGAGCGTGAAGAAATTTCAGGTGGCCTTTCCAATATTGTCAAAACAGACTATTTCTCAACCTTGGCGACAAGTGTCATTGAGAAAGTGCATGAATTCAATATTATCGACAACTACATGTTCGCTTTATTGCCGCAATCTGGATCTGACTCCATGACTTTGAAGGTGTCTCTGAATCGTTCATCATTCCATTCTGCACAGATTCCAACAAGTAATCCAACAAGGGATTTCTTCATTGCGGATGCATCAGAAAACCAGGTTTTCCTGGCTGTCGCTCACAGTGCCAGCACAACTCACCTGTACATTTCAGACACTACTGGGATTAAGTACAGCTTGTCCTTGGAAAGGGTGCTTTATTTCTCACACAACACATCTTCTCCATGGCTGAGGCGATACATACATGACAGATTTGTTGACCTGCACAAAGTTGACGGACTCCGAGGGGTGTACATTGCTAGTCAGCTCACTGTGGGAACTATTGGACGAAGGCACATCTTGTCAAAGATAACATTTGACAAGGGTGGGGTGTGGCAATCAATTGCAGCTCCTAAGACGGACAATAATGGAAGGCCTTTGAATTGTAATCTACCAAACTGCTCACTGCACCTTTCACAAAAATTTGGCTCATACTACCGCTACACTCGTTTCACTCCCATGAGATCCTGGAAGGAAGCCCCTGGTGTCATCATGGCGACAGGTTCTTATGGTGTGAGTTTGCGGAGAAATGCCGATATTTTCCTTTCTGCTGATGGTGGGCTGAGCTGGCATATGATATTACATGCTCCCTGGTGGTGGTATAATGTTGGTGATCATGGTGGAATTTTCATTGCTGTTCCAAGATCCAGACTCACAAACCTGATTTTTTATAGCTGGAATGAAGGCGAAACATGGTCAACGTACAAATTCCTGAACAACTCAAGAATGTATGTGTATGGTTTACTGACGGAACAAGGAGAGAAAAGTGCAGAATTCACCATATTTGGCTCCTATCGTGGTTTGCATAAGTGGGTGGTTGTGCAAATTGATCTTAAAAAAGTGTTGGGAGCACCATGTAGAGATGAGGATTACAAACGTTGGGTTCCATCAGATGAACAAAATGGCACTTGTCTTTTGGGAAGGAAGATGAGTTATGAGCGTCGAATTGCTCATGCTCATTGCTACAATGGATACGACTATGATCGGCCACTCTTACAAGAAAATTGTCCGTGCGACAGGGAGGACTTTCAATGTGACGAAGGCTATATGGCGTTTTTTAATAACGATTGCATATGGTCAAGCATCGTGCCTCCTACTAGATATCCTCCAACTTGCAGACCGGGCCAGACATATCTGCGAACAAAAGGATATCGTAGAGTTCCTGGAGACACATGTCAGGGTGGCATGGAAGATCGGTATGCCGCTGAGACGGCATCTTGTCCAATAAGTGGGCTGCCTGCTTTCTTGTTGTATGCTGCACGTACGTACATCAAGAGAATCACACTTGGAGATCACGTGGAAACTACAATTCCTCTTGGTGGTAGGCTGAGAAATGCCATTGCCTTAGACTACGACTACCAACAAAACTGCATTTACTGGGCTGATATCACATTGGACACCATAAAGAGGTCCTTCCTGAATGGATCTGGGATTATTGAGACGCTTCACAGTGGTATCCAGCAAGTGGAAGGGCTGGCATTGGATTGGCTTGGCGATAACATTTACTGGGTGGACGCTGTTGGAAAGAAGATAGAGGTGTCTAGGGCAGATGGACGATTCCGGAAGAGTCTGATTAGCTCTAATCTTGATCGCCCCAGAGCCATTGTTCTAGATCCCAAAAGGGGGTACATGTATTGGACCGACTGGGGAAGCAGTGCTCGCATTGAGAGAGCCTTCATGTCTGGTACAGGTCGAAGGTCAATTATCTCGACCTCTTTGCAGTGGCCCAATGGTCTTGCCATTGATTTTAGGCAGTTAAAACTTTATTGGACCGATGCTGGTTATGACAAAATCGAGAGAAGCAACTTGGATGGCAGCTATCGCCGGACAATCACCAGAACAGGCTTACCACACCCGTACTCAATATCAATCTATGAAGAGTCCATGTACTGGGATGACTGGTCCACGCTTTCTATACAGAAGGCAAACAAACGAGATGGTGGATCTCGGCAAACCATCAAATCGCACATACGTGGTCTCATGGATGTCAAAATTTTCCACCAGGATGTGCAAACTGGTAACAACAGTTGCTCCAGGCTAAAACCTTGTTCGCACCTCTGTTTGGCTGTGGGCAATGGATTTTCTTGTTCCTGCCCTGATAACATGGTTTCGGTGATATCTGCTGCTGGGATTGTGAGATGTGAATGCTCTCCTGGAGAACACATGGATCCCGTTACCAAGGAATGCAAAACAACGTCTGGCACGTGTAAAACAAACGAGTTCAAGTGTACGAATGGGGCCTGCGTCCCTTCTCACTGGAGGTGCGATCACGACAATGATTGCGGAGACAACTCTGATGAGCAAAATTGCCCTCACACGACGTGTCAATCAGATCAATTCAGATGCGATAATGGCCGTTGTATTTCCGCCTCTTGGAGGTGTGATCATGATAATGATTGCCATGATAACTCGGACGAGAGAAATTGCTCGTATGCTACATGTGGGGCAAACCATTTCACTTGTGCTAACAGACGTTGTATTCCGAGGTCATGGGTGTGTGACTTTGAAAATGACTGTGGTGATAACTCAGATGAAAGAGGCTGCACTCCAGCTCCTACTACCACGCGCCCGTCTTCTAATTGCTCAAGCTCTCAGTTTTCTTGTCATAATGGCCGCTGCATTCCCAGTCGATGGTTCTGTGATGGCGACAACGATTGTGGAGATAGAAGCGATGAACCATCTCGTTGCAGATCTACAAGAACTTGTTCATCCACACAGTTTACGTGTAGTAATGGCCATTGCATTCCAGCATCATGGCGCTGTGATGGTGACAATGACTGCGGTGACTACTCTGACGAAAGGGGCTGTTCATATACCACTCGACCCACTCCCTCCACCGCACCTTGGACTCGGAGAACAAGCTGTGGATCCTATGAATACACCTGCAACAATGGTTACTGTGTTTACTCTTGGGATGTGTGTGATGGAACGGACGATTGTGGCGACTATTCAGATGAGCTCTATTGCGGAACAACAGCTGCCCCAAGCATGACGCCATATACTCGAAGGGCATGCCATTTCTGGGAGTTCGCTTGTTCCAATGGAAGATGTATCAGTTGGAGGTTGAGATGCAACGGATACGCTAATTGTGGCGACGGCAGCGACGAAGTAGGATGCGCTGCCTCTATGATGTCAACAACTCCCGCAACAACACTGCCGCCAAGATGCCCTTCTGGGTGGCTTCGGTGCTCAAACGATCCTTCCAAGATCTGCATCAGAGCTTCCTGGTTGTGTGATGGAATTAGAAATTGCCCTAACGGATGGGACGAGTTGCCAGGGAACTGCGGCCGCCGTACAACATCAAGACCCTTTTGTTCAAGCAGTGAATACCAGTGTGCCTATGGCGGCTGTGTTCTGCGCTCTTCAGTATGCGACGGAATCAGCGAGTGCTACGATGGATCGGACGAAGTTGGCTGTGCTACCCCAAGCCCGTGCACTGGATTCACTTGTGACAGAAACCTTTGTTTATCGCGTTCGAGAATTTGCGATGGTATACATGACTGTCAGGATGGCGCTGATGAAAAGCATTGCGGCGATAGTTTGAAAGTTAAAATTGTCAGTGTAACAAGCATTAACTCCACAAGTGTCACTGTTCAATGGAATCCGATTACCGTACATCCAGCGAACGTCACCTTCCCAGGATACCGTGTTTCCCACAGGTCTGTCTCTCTTCACCATGTACATGATGTTGGAGCGTGGCAGTCGTTTCATACAGGCTTCGTTACCTCTACGATTGTGTCTGGCCTTCAGCCCTGCTCAGTATATGAATTCAGAGTGCAAGTGTTGCTTCAGGGGTTACCGCCAGGGCCTTATTCCGATGTAGTTCCGAAAGGAACCCCGACTTCTGCCGTTACAGCCTCTGCCCCAAGAAACGTGCAACATGTATTGAAAGGACGGGACTCCGTTCTGTTGACATGGGAAGCGCCAGCAACTTACTGCTCCGTCATCACTAACTACAAGGTTCTGTACACGAGGCACGGCCTGGGTAGTTTTACGTCTGTGGAAGTTGGTAACGTTCTGTTTTATCGACTAGGACTCAGTGGGGGACACACATATGATATCAAGGTTAAAGCTCACAGCGCAGAAGGTGACGGAGCGGCGTCAGCGGTTCAAACTGTAAAGATTTCGACCGACCCTCCTTCATTGCCTGTTTCAAACTTGCAACAATCGACAGGCAATGAAACCTCGGTCAGTCTGTCCTGGGGACCTCCAAAAGACAGCTCTGGTGCAGTCGTTCCTGTATCGGGATATTTGATTTACCAAAATGATGTCGGGCTAATTGGCAACACCAGCAATCACAACTTCACTGTCACTGCTCTGAGGTCCATGACGAAATATACTTTCACTGTGAAACCTTATAATTCCGCTGGAGTTGGGCCTCCGTATATTATCGAAGTCACGACTACAGGGGTTAGTGCTCCCACAAATGTTGTTGCGAAACCTTACAACCGCACGGTAGTGTCTTTGTCATGGTCGCCGCCTCAGCATGCCTCTCAAGCACAGAGCAACTATTACTACATCTTCTATGGAACGGTGAGGAGTGGAGTTAGTGCCGTGGCCGTAGGACGCACCTCAGAGAGAACTTATATGGTGGCAAATTTACATCCCGACATCGATTACCTGTTCGAAGTGTCTCTTGGTACTTCAGGGCCCCATAGTCGCCCAGTCAGTTCTCGCACCAAAACAGATATCGCCCATCCACCGGTACACAGTTTAATGGCGACAATTGCTAATGTCACGACTGTTCATCTTGCTTGGCAAAATACAATCAGTAGCACTCCAGTTCTGAATTATAAGATAAAGTATGAACACAAGGAAGGATCAACGTCATATTCGGTAACTGTAACGTCCTCCCAAACCCAGTACACTATCAAGTACCTCATGTTTAACACCACTTACACCTTTGAAGTGAGGACAGTGTTCAAGGACAATAGGCTCTCTGATGCTGTGTCAATTCAAAAGACAATTGGTCCCTTCTCTGCCCCCGTGGGTCCGCTGAAAACCATGGTCCATGCGGATTCCTCAGTCACACTGTCTTGGTCAGCGCCACCGACCATCGACCCAAGAAAATTAGCAGTGACTTATAAAGTATACTGGAATTGCTCGCAATGCCACAATGATTGGTATAACGCAAGAGGTTCGACTTCCACTCATGAAACCAAATACACGTTCTCATGGCTTCAGAGAGGTTTATATGTATTCAGTGTCCATGCCCATACTCGCCTGGGTATTGGAAAGAACGCCAGTGTCTCCTTGGAATATAGCGAGAACTACGGGCAAGTGAAAGACTTGACAGCAACTGTTGGAAGCGATTACACCATAACTGTTCAGTGGAAACCGCCCCCGAACATCGACCCGAAAGAAATAACGAGCTATGCCATTTCGTACAGTAATTACACCACGTATGATAGATACAGCTATTACCGTCCTACGGAATCTGCCAATATCACTGGAAGTGAACATAAATTCAAGATTCATGGACTGGCGGGCTATATCTATACTATTTACGTCAGTGCTGTGACGATACACGGTGAAGGTTCCGTCGCAAACGTCAAAGCTTCAGTGCCACCGCTAACGAGGGTCAGAGTCTGGGGAGCGCATGTCTCCGTGGGCGGTAGATATGGGTTGCAATTGAACGTACAATGGAGAAGACCTTATTTATACGACGAAAATTGGGATGTGGAAGTGTCTTGGCATTGTATCAGGAGCGAAGATTCTAACTGTTGGTGGGGCTATTATAGTCGCTGGTCGACCAAGCGCGTAGGCAGTGCTAATTCGGTGACGGTCAATGCGACACATTATAATACCGCGTACCTTATCAATATTGTAGTCATCACATCTCAGGGCAGAGGTACACCCACTTCTCTGACGAAATATATTCCATCATTGAATGGAAAGCCTGGGAATTTCTCTTGCAATGTCCTGAATGGGAGCAGACAAGGCTATCTTGAGTGTCATTGGACGATGCCTCTTGATGTTAATCCCGCGAGCTATCCCGGAAAGGTCGCTCAAGTGTCCGTAGTGGTACCCTCCAATAGGCCGCCTGTTGACAATTTTATTGCAAAGCCTGATTCGCAAAGTAAGACACTGGTTCATTTGTCGTGGACCCCACCGTCAAATGTCACCGTTCAGTATTATGTGGTGATCACAACGTGTTCGTACTGTGATACCAGAAGAATGACTGTTCCTGGTTCACGCACAGGGTATTCCCTAATACTTCCTTGTGGTAATAGTTACACATTTTCCGTCAGGGCGGTAATCGAAGGCGTTACAGGTAAGGAAAGCACAGCTCACATTACTCTACCCTCTGATATTGGTGCAGTCACTGATCTGGCAGTGAATGTCATTTCTGTCAACAAAAGTCAGCAATTGGATCGTTTGGAGAAAGTCTTTGTCTTAACGTGGAATAAGCCCAAAGACGTCGACGCTTCTGACATCGAGTATTACGAAGTCAGCTTACGGGATGGTAATAAATCCATCAGATCAGTCCATACAAACGATAGAAAGTGGAAGGTGACATATAGCGATTGGCTTTCTGTGGTGACCAATCCAAACCTCAACTTTGTCGTTCGTTGTAAAGCAAAATCATGTTTTGGAGTCGTAAGCACTGTCTCTGAAACGGCTATTAACCCTCCGGCTCCATCAGCGCGTAAGCAAAGCCAAAAAGGTCCAGGTGTTGTGGTATGGGTCGTACCCGTTGCCCTCGTGGGCGTGATCTTAATAGCCATCATCGTCTTCTTCGTGATGAAGTCGCGCCGCCTTGAGCGCTCGATGTTCGCTCTCATGACCAGAAGGACTGTAGATGATGAGGGCGGAGTGACTTTCCATTCATCAGAAGACGAAGTGCCGTTGCTTTATCGCTTTTCCGATGATGAGCCGCTTATCAACGCCTAACGCGGCGCTAATGGGTTTTTTTTATGTCTTTGGCCGTTGTAATGCCACTTTTAGTTCATCTTGTTGGGTGATATGTTAATTGTTTGTACTTCAGCCCTTTAGAAGTAGTCAATAGCGCCTCCCATATATCAACTGTTTGTATCTGGTTAGCGTATGAAACAAATGTAAAAAGTATGT

Protein

chr1Alt.g1904.t2

MKRGVQEIRLLLTFFLFSTFGISKLDAIKKPRERHLFVQRRSPLPGSPTKLQTVERESVDNVGSNEEQDPHKILSRVRRSVNPDLSPRVKEFKLNDSHYLAYVHWAGDHRDTIVLLTRDFTPNLHSNSHVWVSKDYGQSFTNLTHMFRIPGRSNAYARVDMFYSSPVDKSRYLLVDTLHNLMFSTIDDFATVITVSLSFSPDEILYHPSSSNVVLAYDESASKLYYSTDFGFRWTLKEENVRSYYWGIPPWDNANTLYIEREEISGGLSNIVKTDYFSTLATSVIEKVHEFNIIDNYMFALLPQSGSDSMTLKVSLNRSSFHSAQIPTSNPTRDFFIADASENQVFLAVAHSASTTHLYISDTTGIKYSLSLERVLYFSHNTSSPWLRRYIHDRFVDLHKVDGLRGVYIASQLTVGTIGRRHILSKITFDKGGVWQSIAAPKTDNNGRPLNCNLPNCSLHLSQKFGSYYRYTRFTPMRSWKEAPGVIMATGSYGVSLRRNADIFLSADGGLSWHMILHAPWWWYNVGDHGGIFIAVPRSRLTNLIFYSWNEGETWSTYKFLNNSRMYVYGLLTEQGEKSAEFTIFGSYRGLHKWVVVQIDLKKVLGAPCRDEDYKRWVPSDEQNGTCLLGRKMSYERRIAHAHCYNGYDYDRPLLQENCPCDREDFQCDEGYMAFFNNDCIWSSIVPPTRYPPTCRPGQTYLRTKGYRRVPGDTCQGGMEDRYAAETASCPISGLPAFLLYAARTYIKRITLGDHVETTIPLGGRLRNAIALDYDYQQNCIYWADITLDTIKRSFLNGSGIIETLHSGIQQVEGLALDWLGDNIYWVDAVGKKIEVSRADGRFRKSLISSNLDRPRAIVLDPKRGYMYWTDWGSSARIERAFMSGTGRRSIISTSLQWPNGLAIDFRQLKLYWTDAGYDKIERSNLDGSYRRTITRTGLPHPYSISIYEESMYWDDWSTLSIQKANKRDGGSRQTIKSHIRGLMDVKIFHQDVQTGNNSCSRLKPCSHLCLAVGNGFSCSCPDNMVSVISAAGIVRCECSPGEHMDPVTKECKTTSGTCKTNEFKCTNGACVPSHWRCDHDNDCGDNSDEQNCPHTTCQSDQFRCDNGRCISASWRCDHDNDCHDNSDERNCSYATCGANHFTCANRRCIPRSWVCDFENDCGDNSDERGCTPAPTTTRPSSNCSSSQFSCHNGRCIPSRWFCDGDNDCGDRSDEPSRCRSTRTCSSTQFTCSNGHCIPASWRCDGDNDCGDYSDERGCSYTTRPTPSTAPWTRRTSCGSYEYTCNNGYCVYSWDVCDGTDDCGDYSDELYCGTTAAPSMTPYTRRACHFWEFACSNGRCISWRLRCNGYANCGDGSDEVGCAASMMSTTPATTLPPRCPSGWLRCSNDPSKICIRASWLCDGIRNCPNGWDELPGNCGRRTTSRPFCSSSEYQCAYGGCVLRSSVCDGISECYDGSDEVGCATPSPCTGFTCDRNLCLSRSRICDGIHDCQDGADEKHCGDSLKVKIVSVTSINSTSVTVQWNPITVHPANVTFPGYRVSHRSVSLHHVHDVGAWQSFHTGFVTSTIVSGLQPCSVYEFRVQVLLQGLPPGPYSDVVPKGTPTSAVTASAPRNVQHVLKGRDSVLLTWEAPATYCSVITNYKVLYTRHGLGSFTSVEVGNVLFYRLGLSGGHTYDIKVKAHSAEGDGAASAVQTVKISTDPPSLPVSNLQQSTGNETSVSLSWGPPKDSSGAVVPVSGYLIYQNDVGLIGNTSNHNFTVTALRSMTKYTFTVKPYNSAGVGPPYIIEVTTTGVSAPTNVVAKPYNRTVVSLSWSPPQHASQAQSNYYYIFYGTVRSGVSAVAVGRTSERTYMVANLHPDIDYLFEVSLGTSGPHSRPVSSRTKTDIAHPPVHSLMATIANVTTVHLAWQNTISSTPVLNYKIKYEHKEGSTSYSVTVTSSQTQYTIKYLMFNTTYTFEVRTVFKDNRLSDAVSIQKTIGPFSAPVGPLKTMVHADSSVTLSWSAPPTIDPRKLAVTYKVYWNCSQCHNDWYNARGSTSTHETKYTFSWLQRGLYVFSVHAHTRLGIGKNASVSLEYSENYGQVKDLTATVGSDYTITVQWKPPPNIDPKEITSYAISYSNYTTYDRYSYYRPTESANITGSEHKFKIHGLAGYIYTIYVSAVTIHGEGSVANVKASVPPLTRVRVWGAHVSVGGRYGLQLNVQWRRPYLYDENWDVEVSWHCIRSEDSNCWWGYYSRWSTKRVGSANSVTVNATHYNTAYLINIVVITSQGRGTPTSLTKYIPSLNGKPGNFSCNVLNGSRQGYLECHWTMPLDVNPASYPGKVAQVSVVVPSNRPPVDNFIAKPDSQSKTLVHLSWTPPSNVTVQYYVVITTCSYCDTRRMTVPGSRTGYSLILPCGNSYTFSVRAVIEGVTGKESTAHITLPSDIGAVTDLAVNVISVNKSQQLDRLEKVFVLTWNKPKDVDASDIEYYEVSLRDGNKSIRSVHTNDRKWKVTYSDWLSVVTNPNLNFVVRCKAKSCFGVVSTVSETAINPPAPSARKQSQKGPGVVVWVVPVALVGVILIAIIVFFVMKSRRLERSMFALMTRRTVDDEGGVTFHSSEDEVPLLYRFSDDEPLINA

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98930	Sortilin-related receptor (Fragment) OS=Gallus gallus OX=9031 GN=SORL1 PE=2 SV=1
Q95209	Sortilin-related receptor OS=Oryctolagus cuniculus OX=9986 GN=SORL1 PE=1 SV=1
O88307	Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15902 all species →	Sortilin-Vps10	Sortilin, neurotensin receptor 3,	Repeat	Interproscan
PF00057 all species →	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF00058 all species →	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan
PF15901 all species →	Sortilin_C	Sortilin, neurotensin receptor 3, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036055 all species →	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR031778 all species →	Domain	Sortilin, N-terminal	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR002172 all species →	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR023415 all species →	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR050310 all species →	Family	VPS10-related sortilin family receptors	Interproscan
IPR000033 all species →	Repeat	LDLR class B repeat	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR031777 all species →	Domain	Sortilin, C-terminal	Interproscan
IPR006581 all species →	Domain	VPS10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12106 all species →	SORTILIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006892 all species →	Biological Process	post-Golgi vesicle-mediated transport	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24498	SORL1; sortilin-related receptor	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g1904.t2 across 39 RNA-seq samples of Acropora digitifera. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

39Samples

0TPM > 0

1Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Coral branch	39	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR23047206	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047207	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047208	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047209	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047210	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047211	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047212	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047213	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047214	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047215	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047216	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047217	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047218	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047219	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047220	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047221	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047222	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047223	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047224	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047225	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047226	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047227	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047228	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047229	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047230	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047231	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047232	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047233	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047234	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047235	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047236	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047237	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047238	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047239	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047240	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047241	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047242	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047243	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047244	Coral branch	Coral branch	adult	not recorded	SRP416931

Source: CnidoSite RNA-seq expression matrices (ADIGI_TPM, StringTie quantification over 39 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.