Gene detail

Detailed information of g1909.t1 in Tripedalia maipoensis

Genomic Location: scaffold_10:27363799...27371029
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR051754 all species →	Family	Chromatin and ER Membrane Complex Protein	Interproscan
IPR017884 all species →	Domain	SANT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21397 all species →	CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016589 all species →	Cellular Component	NURF complex	Interproscan
GO:0071339 all species →	Cellular Component	MLL1 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23406	BAP18; chromatin complexes subunit BAP18	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.