Gene detail

Detailed information of g19101.t1.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_029211120.2, phenylalanine--tRNA ligase beta subunit-like isoform X1 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9WUA2	Phenylalanine--tRNA ligase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=2
Q9NSD9	Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens OX=9606 GN=FARSB PE=1 SV=3
Q5R7F7	Phenylalanine--tRNA ligase beta subunit OS=Pongo abelii OX=9601 GN=FARSB PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17759	tRNA_synthFbeta	Phenylalanyl tRNA synthetase beta chain CLM domain	Domain	Interproscan
PF03484	B5	tRNA synthetase B5 domain	Domain	Interproscan
PF03483	B3_4	B3/4 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045060	Family	Phenylalanine-tRNA ligase, class IIc, beta subunit	Interproscan
IPR041616	Domain	Phenylalanyl tRNA synthetase beta chain, core domain	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR005147	Domain	tRNA synthetase, B5-domain	Interproscan
IPR004531	Family	Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archaeal/eukaryotic type	Interproscan
IPR020825	Homologous_superfamily	Phenylalanyl-tRNA synthetase-like, B3/B4	Interproscan
IPR005146	Domain	B3/B4 tRNA-binding domain	Interproscan
IPR009061	Homologous_superfamily	Putative DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10947	PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004826	Molecular Function	phenylalanine-tRNA ligase activity	Interproscan
GO:0006432	Biological Process	phenylalanyl-tRNA aminoacylation	Interproscan
GO:0009328	Cellular Component	phenylalanine-tRNA ligase complex	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01890	FARSB, pheT; phenylalanyl-tRNA synthetase beta chain	EC:6.1.1.20	Transfer RNA biogenesis	ko03016	deepkoala