Detailed information of g19133.t1 in Montipora capitata

Genomic Location: Sc0000982:76072...78789
NR annotation: XP_027054033.1, ribosome production factor 1-like [Pocillopora damicornis]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8AVP1Ribosome production factor 1 OS=Xenopus laevis OX=8355 GN=rpf1 PE=2 SV=1
Q9H9Y2Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2
Q5R631Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001859 (this species only)

 Pfam domain
No Pfam domain signature was detected for g19133.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR044281
all species →		FamilyU3 snoRNP protein/Ribosome production factor 1Interproscan
IPR007109
all species →		DomainBrix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22734
all species →		U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000460
all species →		Biological Processmaturation of 5.8S rRNAInterproscan
GO:0000470
all species →		Biological Processmaturation of LSU-rRNAInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0030687
all species →		Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042134
all species →		Molecular FunctionrRNA primary transcript bindingInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g19133.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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