Gene detail

Detailed information of g19151.t1 in Montipora capitata

Genomic Location: Sc0000985:26818...46681
NR annotation: XP_029202987.2, voltage-dependent T-type calcium channel subunit alpha-1H-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g19151.t1

atggccatggggctttttggaaagatggcctattttaatgatccttggaatcgccttgattgctttattgttgctgcgggttataacttatcaaacttttacgaaccttcgttcgacaatcccgacttcgtatgtgcattacccgacgtaccaggaatgcagaaatgcaccagcgagtttatcacaccactcaagcatgaaaatggggggcaatgctctcttacgtatgaggagtccctcaacaaacctctaatttcaaatcattccaatgactgcgtggactggcatcaatattacagaaagtgtaaacaggaaggtgataaccctgcttggggagccattgggtttgataatattttcattgcttgggtcgccatttttcaggtgatcactttagagggttgggcagatataatgtactttgtacaggatgcacatggattttggaactggatttattttgtcattctaattgtaattgcttcgtattttatgactaacttgtgtctagttgtgataacaacgcaatttcaagaaacaaaacaacgtgaaaatgaacttttacgagcaagccgccgccgagaagggacgagtacaagtaccatagcaagcagtagatatggaaaggatggctgttggattgagatacttaagtatatcgaacatttattcaaaagacttaaaagaagatttcaaaaacgatttaaccggaaatattgcgaagattcaaacaaaagaacgagaatttcgaagcgcagaaaacggcggaaacggaaaaagaaattagtttatcatcatcatcatcaccaccaccatcatcatcattatcatcaccacgtgtactgcacagatcccggatgtcaacccagtaacgttcttccgggagctttgaacctcacgccaaatgcgtcttgcgtagatgtccagcagtcgcaaggcaaacaggataaagcgaacacaaacagacttacggttcctggacaggaactcagtaacggggaacaagacagtattggccggcctggagaaataccaacaatttctattataactggttccacttgttcagttcgcaaggagcctacatcttcatcacagggcgaaatgatcactacggcaacagcagcggttgcggtcaacggcagatctgccgctgctgatatagcagcacacactttcttgtcagcggcttcattatccagtgcagccgcaaccgctactgcaagtgcagctgcagcgtcggcaatacataacgtttgtacttgcgcggttgaacacgtcgaggaagacataaaggtggattacgagtctgaatgcgtctatgaagagagtgaagagagtgagaatgaattaacagataatgaagaagccggggacacgtcacaaaaaaagacgcagtgcaagcgatttcgtcagttgtgtcgccgcaatgttgacagcaaatggtttatgtatatcatcatggggtccatatttttcaatactcttagcatggggatagaatatcacggacagccttcaaagatgactgaagtacttgaaatcttgaactacatttttacggccatatttggtcttgaaatgttcctgaagctgctaggccttggtccctatggatacatcaaagatcccttcaatttgtttgacggcttcattgttatcatgagtattgtagaactttttggcgatggtaacagcagtatttctgtcctgaggtcattccgattactgcgcatattcaaactcgtgcgtttcctaccagcactacggcgtcaattgatggtaatgatccacaccatggacaatgtgatgacatttctggctttattggctctgtttattttcaccgccagtattctgggaatgaacttgttcggcggcaagtactcctttgagactgaggaaggagaatacgtcaccgcgcgagctaattttgatgacttgttttgggctttagtaactgttttccaggttttgacccaagaagactggaacacagtgatgtacgatggaatgagagctacttctaagtgggctgctctatacttcatcttgctgatgaccattggaaattacatcctattcaatttgcttgtagctatcttagtggaaggatttgccaatcaaccggaaaaaacagcaagtactttgagcatcaaatcgaaagggtcaaagcaagacgaaagttacgtggcatgtaaagatgtgagcccgccgtacgagaacccatcctcgccccaggcgccttccctggtgtgcgtgagtccgatgctctcatcgacaaatgtggagtcagctagtgcgcacaatcagaaaacaaggaatgatgaaacttctgcgccgatgcaacgcttacgctgctcctttccgtctctgtctcccagatgttcaatgtttagagatgaatgccacgtctcagccccagcctccccgacccggatttctccacgagtgacacggaaggccttgtcatttggagacacaactacaatggtaattgtcaatccagcgaaagctgaaaggtgtattactactgatgatgagatgagtgcacgggaggatgacgaaacagaggttaggattcaggacagctcgtcatgttgttatcaaagaacagcttgggccttatatatcttttcaccttcaaacaagtttcgaaaattgatgatagctttgtacacaaacaagtggtttgatcgcgttgtactcacgtttatccttttgaattgcgttgtcatggctctggaaagaccggatcttccagatgatagcgaggtaatagcccttggtctctgggtgggacctggcgcatatctgcgaagcacgtggaatgtgatggatggcttcttggttgtcgtctcttggattgacgtcattgtcaccttgacgacgaacacggaaagctccattttaggagtgttgcgcgtttttcgcgcgctaagaactctcagaccattgagagtgattagcagggctcctggtctaaaagttgtggtagagactctgataacctccttgaagcccattggaaacattgtgcttatcgcagcaacatttttcatcatatttggcattcttggagtacagctgtttaaaggaaagttctatcactgtgtggaggcctctgatgtcaattcgagagttgactgtctaagtaaagggcactcctggataaacaaggaatacaattttgataacttggctaaggcccttttaacattgttcgtcttttctactaaagatggctgggtaaccataatgtatgatgggatagatgctgtcggtgttgataaacagccaataagaaactacaacaaatggaatgtcttgtacttcgtggcgtttctgctgctagccggctttgtggtgctcaacatgttggttggtgtagtcgtggagaattttaaaaagtgccgtgatattatagagaaagaccgcttagcggaaaaagagaaagaaaaagaacaagaaaaggctaaaaagcggcaggcagaagcagacaaagaagaggctgaagaatttctccaacctcggcggatttttcatcgaatttgcacacatggctattttgaccttggtatatcagctgtcattgtccttaatgtcatttgtatggctatggaacactataagcaaccacaggaaatgagtgacttcttagagtacgcaaactatgtgttcactgccatcttcatactggaaggcgtattaaaaatttatgctcttggtttcaagaaatacattaaagaaagatggaatcagttggatcttatcataatcttgctttcgattgttggcattgttctggaggaaatggatgcttcactgccaataaaccccacaattatccgagtcatgagggttctcagaattgcacgagttctgaagctgttaaagacggctgaaggaatccggaagttactagataccgtcgctgaggcgttaccacaagttggcaacttggggcttttattcctgctgatgttctttatatttgcagccttgggaatggaactctttggcgaaattaattgcagtagcgatgatgtaccgtgcgagggattggaccatcatgcacatttcaagaattttggattcgcgatgctgactttgtttcgtgtgtccacaggggataactggaatggaatcctaaaggacatcattaatgagaaacgatgcgcgaaggatcctccgactggatgctcagccctggaacacattgctccaatttactttgcaatttttgtgctcgcaacgcagtttgtcctccttaatgttgtggttgctgtcttgatgaagcacttagaggacgcaaaagaagaaatttctgttacttcgtcaagagaaggcgaacttgaaaacaaactagcaacgaaaacggatggaaatggagagcaagacagttacaaagatggccaacgaaaccagggtgagagcgttccagagaaaggagcaaataataacgccagggctgctattccagcccaggttggtttggatagacaagggccaaatgactcagaaagtagtttgagttcctttgagtacgcagtcagatcacagccagtcagtgctagctcaagacatcggcttcctccgatgaacaaaacacaatctaattggtgcgctaatccagctaccctgcggcttccgccaataggaagtcagtcccgtgcgattaacaaaatcggtagaagctcggagaaagtcgactcattgacgtcgggactaccgagtcccgaaagtgaaaaatcagacaccaaatcaagtgacggacatatatcaccaagagctccaatttacgtcatgagcgaggatagtacggagatatatgatagcaatatggaagtcgaccgggaaccgagtaaagttttcagacctgttaataactgctcagccacccgatcacaatcaccgcactcaagtagtgaggaagaagggcaaaagaagtttttcaaaaagccttttcgtaaatcagaccctaagcgagcaaagagttcgggcaaaagagagtctaagacaacagccagggttttacccataccgaacactgaaccggataagcaggagatcaaaccagttaaaccagatgctcgatgggctactccagcgtttagtggcttacaaccaccgggcatgcgcaaggacaataagcttgaaccatctgtcacaacgaaaaaagatgaagacaaaagctatgagatgcaaagctacgtataa

Transcript

g19151.t1

ATGGCCATGGGGCTTTTTGGAAAGATGGCCTATTTTAATGATCCTTGGAATCGCCTTGATTGCTTTATTGTTGCTGCGGGTTATAACTTATCAAACTTTTACGAACCTTCGTTCGACAATCCCGACTTCGTATGTGCATTACCCGACGTACCAGGAATGCAGAAATGCACCAGCGAGTTTATCACACCACTCAAGCATGAAAATGGGGGGCAATGCTCTCTTACGTATGAGGAGTCCCTCAACAAACCTCTAATTTCAAATCATTCCAATGACTGCGTGGACTGGCATCAATATTACAGAAAGTGTAAACAGGAAGGTGATAACCCTGCTTGGGGAGCCATTGGGTTTGATAATATTTTCATTGCTTGGGTCGCCATTTTTCAGGTGATCACTTTAGAGGGTTGGGCAGATATAATGTACTTTGTACAGGATGCACATGGATTTTGGAACTGGATTTATTTTGTCATTCTAATTGTAATTGCTTCGTATTTTATGACTAACTTGTGTCTAGTTGTGATAACAACGCAATttcaagaaacaaaacaacGTGAAAATGAACTTTTACGAGCAAGCCGCCGCCGAGAAGGGACGAGTACAAGTACCATAGCAAGCAGTAGATATGGAAAGGATGGCTGTTGGATTGAGATACTTAAGTATATCGAACATTTATTCAAAAGACTTAAAAGAAGATTTCAAAAACGATTTAACCGGAAATATTGCGAAGATTCAAACAAAAGAACGAGAATTTCGAAGCGCAGAAAACGGCGGAAACGGAAAAAGAAATtagtttatcatcatcatcatcaccaccaccatcatcatcattatcatcaccaCGTGTACTGCACAGATCCCGGATGTCAACCCAGTAACGTTCTTCCGGGAGCTTTGAACCTCACGCCAAATGCGTCTTGCGTAGATGTCCAGCAGTCGCAAGGCAAACAGGATAAAGCGAACACAAACAGACTTACGGTTCCTGGACAGGAACTCAGTAACGGGGAACAAGACAGTATTGGCCGGCCTGGAGAAATACCAACAATTTCTATTATAACTGGTTCCACTTGTTCAGTTCGCAAGGAGCCTACATCTTCATCACAGGGCGAAATGATCACTACGGCAACAGCAGCGGTTGCGGTCAACGGCAGATCTGCCGCTGCTGATATAGCAGCACACACTTTCTTGTCAGCGGCTTCATTATCCAGTGCAGCCGCAACCGCTACTGCAAGTGCAGCTGCAGCGTCGGCAATACATAACGTTTGTACTTGCGCGGTTGAACACGTCGAGGAAGACATAAAGGTGGATTACGAGTCTGAATGCGTCTATGAAGAGAGTGAAGAGAGTGAGAATGAATTAACAGATAATGAAGAAGCCGGGGACACGTCACAAAAAAAGACGCAGTGCAAGCGATTTCGTCAGTTGTGTCGCCGCAATGTTGACAGCAAATGGTTTATGTATATCATCATGGGGTCCATATTTTTCAATACTCTTAGCATGGGGATAGAATATCACGGACAGCCTTCAAAGATGACTGAAGTACTTGAAATCTTGAACTACATTTTTACGGCCATATTTGGTCTTGAAATGTTCCTGAAGCTGCTAGGCCTTGGTCCCTATGGATACATCAAAGATCCCTTCAATTTGTTTGACGGCTTCATTGTTATCATGAGTATTGTAGAACTTTTTGGCGATGGTAACAGCAGTATTTCTGTCCTGAGGTCATTCCGATTACTGCGCATATTCAAACTCGTGCGTTTCCTACCAGCACTACGGCGTCAATTGATGGTAATGATCCACACCATGGACAATGTGATGACATTTCTGGCTTTATTGGCTCTGTTTATTTTCACCGCCAGTATTCTGGGAATGAACTTGTTCGGCGGCAAGTACTCCTTTGAGACTGAGGAAGGAGAATACGTCACCGCGCGAGCTAATTTTGATGACTTGTTTTGGGCTTTAGTAACTGTTTTCCAGGTTTTGACCCAAGAAGACTGGAACACAGTGATGTACGATGGAATGAGAGCTACTTCTAAGTGGGCTGCTCTATACTTCATCTTGCTGATGACCATTGGAAATTACATCCTATTCAATTTGCTTGTAGCTATCTTAGTGGAAGGATTTGCCAATCAACCGGAAAAAACAGCAAGTACTTTGAGCATCAAATCGAAAGGGTCAAAGCAAGACGAAAGTTACGTGGCATGTAAAGATGTGAGCCCGCCGTACGAGAACCCATCCTCGCCCCAGGCGCCTTCCCTGGTGTGCGTGAGTCCGATGCTCTCATCGACAAATGTGGAGTCAGCTAGTGCGCACAATCAGAAAACAAGGAATGATGAAACTTCTGCGCCGATGCAACGCTTACGCTGCTCCTTTCCGTCTCTGTCTCCCAGATGTTCAATGTTTAGAGATGAATGCCACGTCTCAGCCCCAGCCTCCCCGACCCGGATTTCTCCACGAGTGACACGGAAGGCCTTGTCATTTGGAGACACAACTACAATGGTAATTGTCAATCCAGCGAAAGCTGAAAGGTGTATTACTACTGATGATGAGATGAGTGCACGGGAGGATGACGAAACAGAGGTTAGGATTCAGGACAGCTCGTCATGTTGTTATCAAAGAACAGCTTGGGCCTTATATATCTTTTCACCTTCAAACAAGTTTCGAAAATTGATGATAGCTTTGTACACAAACAAGTGGTTTGATCGCGTTGTACTCACGTTTATCCTTTTGAATTGCGTTGTCATGGCTCTGGAAAGACCGGATCTTCCAGATGATAGCGAGGTAATAGCCCTTGGTCTCTGGGTGGGACCTGGCGCATATCTGCGAAGCACGTGGAATGTGATGGATGGCTTCTTGGTTGTCGTCTCTTGGATTGACGTCATTGTCACCTTGACGACGAACACGGAAAGCTCCATTTTAGGAGTGTTGCGCGTTTTTCGCGCGCTAAGAACTCTCAGACCATTGAGAGTGATTAGCAGGGCTCCTGGTCTAAAAGTTGTGGTAGAGACTCTGATAACCTCCTTGAAGCCCATTGGAAACATTGTGCTTATCGCAGCAAcatttttcatcatatttggcATTCTTGGAGTACAGCTGTTTAAAGGAAAGTTCTATCACTGTGTGGAGGCCTCTGATGTCAATTCGAGAGTTGACTGTCTAAGTAAAGGGCACTCCTGGATAAACAAGGAATACAATTTTGATAACTTGGCTAAGGCCCTTTTAACATTGTTCGTCTTTTCTACTAAAGATGGCTGGGTAACCATAATGTATGATGGGATAGATGCTGTCGGTGTTGATAAACAGCCAATAAGAAACTACAACAAATGGAATGTCTTGTACTTCGTGGCGTTTCTGCTGCTAGCCGGCTTTGTGGTGCTCAACATGTTGGTTGGTGTAGTCGTGGAGAATTTTAAAAAGTGCCGTGATATTATAGAGAAAGACCGCTTAGcggaaaaagagaaagaaaaagaacaagaaaaggCTAAAAAGCGGCAGGCAGAAGCAGACAAAGAAGAGGCTGAAGAATTTCTCCAACCTCGGCGGATTTTTCATCGAATTTGCACACATGGCTATTTTGACCTTGGTATATCAGCTGTCATTGTCCTTAATGTCATTTGTATGGCTATGGAACACTATAAGCAACCACAGGAAATGAGTGACTTCTTAGAGTACGCAAACTatgtgttcactgccatcttcaTACTGGAAGGCGTATTAAAAATTTATGCTCTTGGTTTCAAGAAATACATTAAAGAAAGATGGAATCAGTTGGATCTTATCATAATCTTGCTTTCGATTGTTGGCATTGTTCTGGAGGAAATGGATGCTTCACTGCCAATAAACCCCACAATTATCCGAGTCATGAGGGTTCTCAGAATTGCACGAGttCTGAAGCTGTTAAAGACGGCTGAAGGAATCCGGAAGTTACTAGATACCGTCGCTGAGGCGTTACCACAAGTTGGCAACTTGGGGCTTTTATTCCTGCTGATGTTCTTTATATTTGCAGCCTTGGGAATGGAACTCTTTGGCGAAATTAATTGCAGTAGCGATGATGTACCGTGCGAGGGATTGGACCATCATGCACATTTCAAGAATTTTGGATTCGCGATGCTGACTTTGTTTCGTGTGTCCACAGGGGATAACTGGAATGGAATCCTAAAGGACATCATTAATGAGAAACGATGCGCGAAGGATCCTCCGACTGGATGCTCAGCCCTGGAACACATTGCTccaatttactttgcaatttttGTGCTCGCAACGCAGTTTGTCCTCCTTAATGTTGTGGTTGCTGTCTTGATGAAGCACTTAGAGGACgcaaaagaagaaatttctGTTACTTCGTCAAGAGAAGGCgaacttgaaaacaaactaGCAACGAAAACGGATGGAAATGGAGAGCAAGACAGTTACAAAGATGGCCAACGAAACCAGGGTGAGAGCGTTCCAGAGAAAGGAGCAAATAATAACGCCAGGGCTGCTATTCCAGCCCAGGTTGGTTTGGATAGACAAGGGCCAAATGACTCAGAAAGTAGTTTGAGTTCCTTTGAGTACGCAGTCAGATCACAGCCAGTCAGTGCTAGCTCAAGACATCGGCTTCCTCCGATGAACAAAACACAATCTAATTGGTGCGCTAATCCAGCTACCCTGCGGCTTCCGCCAATAGGAAGTCAGTCCCGTGCGATTAACAAAATCGGTAGAAGCTCGGAGAAAGTCGACTCATTGACGTCGGGACTACCGAGTCCCGAAAGTGAAAAATCAGACACCAAATCAAGTGACGGACATATATCACCAAGAGCTCCAATTTACGTCATGAGCGAGGATAGTACGGAGATATATGATAGCAATATGGAAGTCGACCGGGAACCGAGTAAAGTTTTCAGACCTGTTAATAACTGCTCAGCCACCCGATCACAATCACCGCACTCAAGTAGTGaggaagaagggcaaaagaagTTTTTCAAAAAGCCTTTTCGTAAATCAGACCCTAAGCGAGCAAAGAGTTCGGGCAAAAGAGAGTCTAAGACAACAGCCAGGGTTTTACCCATACCGAACACTGAACCGGATAAGCAGGAGATCAAACCAGTTAAACCAGATGCTCGATGGGCTACTCCAGCGTTTAGTGGCTTACAACCACCGGGCATGCGCAAGGACAATAAGCTTGAACCATCTGTCACAACGAAAAAAGATGAAGACAAAAGCTATGAGATGCAAAGCTACGTATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O88427	Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus musculus OX=10090 GN=Cacna1h PE=1 SV=3
O95180	Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo sapiens OX=9606 GN=CACNA1H PE=1 SV=4
Q9EQ60	Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus norvegicus OX=10116 GN=Cacna1h PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001282 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR043203 all species →	Family	Voltage-gated cation channel calcium and sodium	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10037 all species →	VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001518 all species →	Cellular Component	voltage-gated sodium channel complex	Interproscan
GO:0005248 all species →	Molecular Function	voltage-gated sodium channel activity	Interproscan
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008332 all species →	Molecular Function	low voltage-gated calcium channel activity	Interproscan
GO:0043005 all species →	Cellular Component	neuron projection	Interproscan
GO:0070509 all species →	Biological Process	calcium ion import	Interproscan
GO:0086010 all species →	Biological Process	membrane depolarization during action potential	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04855	CACNA1H, CAV3.2; voltage-dependent calcium channel T type alpha-1H	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g19151.t1 across 48 RNA-seq samples of Montipora capitata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

47TPM > 0

3Conditions

163.2Max TPM

26.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole organisms · ambient pH treatment	21	21	28.86	163.17
whole organisms · low pH treatment	15	14	19.49	91.42
whole organisms · extra low pH treatment pH treatment	12	12	32.48	128.31

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR11452222	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	163.17
SRR11452230	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	132.38
SRR11452228	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	125.68
SRR11452232	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	59.63
SRR11452231	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	56.13
SRR11452234	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	22.98
SRR11452233	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	14.55
SRR11452237	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	5.08
SRR11452243	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	4.22
SRR11452242	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	3.00
SRR11452240	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	2.84
SRR11452252	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	2.54
SRR11452251	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	2.32
SRR11452262	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	2.29
SRR11452250	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	2.16
SRR11452246	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	1.64
SRR11452217	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	1.40
SRR11452263	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	1.28
SRR11452254	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	1.24
SRR11452260	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	0.87
SRR11452259	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	0.60
SRR11452224	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	91.42
SRR11452223	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	87.26
SRR11452221	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	86.86
SRR11452238	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	4.99
SRR11452241	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	4.14
SRR11452236	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	3.31
SRR11452249	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	2.59
SRR11452247	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	2.18
SRR11452216	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	2.00
SRR11452258	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	1.78
SRR11452229	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	1.75
SRR11452245	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	1.67
SRR11452218	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	1.45
SRR11452253	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	0.89
SRR11452255	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	0.00
SRR11452227	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	128.31
SRR11452225	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	121.62
SRR11452226	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	118.57
SRR11452235	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	5.57
SRR11452239	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	4.17
SRR11452261	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	2.28
SRR11452248	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	2.13
SRR11452244	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	2.03
SRR11452220	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	1.65
SRR11452219	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	1.30
SRR11452257	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	1.22
SRR11452256	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	0.89

Source: CnidoSite RNA-seq expression matrices (MCAPI_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.