Detailed information of g192.t1 in Montipora capitata

Genomic Location: Sc0000001:1900845...1925347
NR annotation: XP_044175386.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114969165 [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P01266Thyroglobulin OS=Homo sapiens OX=9606 GN=TG PE=1 SV=5
P06882Thyroglobulin OS=Rattus norvegicus OX=10116 GN=Tg PE=1 SV=4
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004855 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00086
all species →
Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF00092
all species →
VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035
all species →
Domainvon Willebrand factor, type AInterproscan
IPR036465
all species →
Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR000716
all species →
DomainThyroglobulin type-1Interproscan
IPR036857
all species →
Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR036058
all species →
Homologous_superfamilyKazal domain superfamilyInterproscan
IPR002350
all species →
DomainKazal domainInterproscan
IPR050525
all species →
FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020
all species →
COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g192.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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