Detailed information of g1922.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: WP_132832258.1, SMP-30/gluconolactonase/LRE family protein [Pseudomonas sp. JUb52]
Species Calvadosia cruxmelitensis · all data for this species · gene families

 Sequence
Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q64374Regucalcin OS=Mus musculus OX=10090 GN=Rgn PE=1 SV=1
Q9TTJ6Regucalcin OS=Oryctolagus cuniculus OX=9986 GN=RGN PE=2 SV=1
Q06AA3Regucalcin OS=Sus scrofa OX=9823 GN=RGN PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000002 (this species only)
Orthogroup (gene family)OG0000005 (this species only)
Orthogroup (gene family)OG0004130 (this species only)
Orthogroup (gene family)OG0080661 (this species only)
Orthogroup (gene family)OG0173089 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917
all species →		RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF08450
all species →		SGLSMP-30/Gluconolactonase/LRE-like regionRepeatInterproscan
PF14529
all species →		Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041373
all species →		DomainReverse transcriptase, RNase H-like domainInterproscan
IPR005511
all species →		FamilySenescence marker protein-30 (SMP-30)Interproscan
IPR013658
all species →		DomainSMP-30/Gluconolactonase/LRE-like regionInterproscan
IPR011042
all species →		Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34072
all species →		ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR10907
all species →		REGUCALCINInterproscan
PTHR33395
all species →		TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004341
all species →		Molecular Functiongluconolactonase activityInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0019853
all species →		Biological ProcessL-ascorbic acid biosynthetic processInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0007508
all species →		Biological Processlarval heart developmentInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan
GO:0061343
all species →		Biological Processcell adhesion involved in heart morphogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g1922.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP