Gene detail

Detailed information of g1930.t1.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: XP_018526865.2, WD repeat, SAM and U-box domain-containing protein 1 [Lates calcarifer]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9D0I6	WD repeat, SAM and U-box domain-containing protein 1 OS=Mus musculus OX=10090 GN=Wdsub1 PE=2 SV=1
A0AUS0	WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio OX=7955 GN=wdsub1 PE=2 SV=1
Q5FVN8	WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02825	WWE	WWE domain	Family	Interproscan
PF04564	U-box	U-box domain	Domain	Interproscan
PF00536	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037197	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR001660	Domain	Sterile alpha motif domain	Interproscan
IPR003613	Domain	U-box domain	Interproscan
IPR004170	Domain	WWE domain	Interproscan
IPR052085	Family	WD repeat, SAM and U-box domain-containing	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46573	WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan