Gene detail

Detailed information of g19309.t1.1 in Blastomussa wellsi

Genomic Location: not available for this species
NR annotation: XP_015748886.1, PREDICTED: uncharacterized protein K02A2.6-like [Acropora digitifera]
Species abbreviation BWELL · all data for this species · gene families

Sequence

CDS

g19309.t1

ATGCCTGATAACGAAGAAGCAACACCTCAAGAATTGCCCCTGCTACCAGGACAAAACCAAACTCAGCCACAGCAACCGAGTCAACTTCCACTTCCCGCACGATTTGATGGCGCGAATGGCCCACAACAAGCCGAATGTTGGATTCGGTGGAGCCGACGCTTCGAACGTTACAGGGTTGCTTCTGGCCTAAAAAGTAAACCCGAATATGAACAAGTGAGTACCTTACTGTATGCCATGGGAGACTGTGCAGACGACATTCTAGCCACTCTTCGCCTCGATGAAACCAAAGCTACGTATAACGAAGTTCTAACCGCCCTCAACGGCTATTTTGATGTCCGCCGCAATTTAATTGTGCAACGAGCCCTCTTTAACAAGCGACACCAGTCGGCAGGCGAGTCAGTGGACACGTTCATTCAGGATCTATACAGGCTTGCCGAAGACTGCGAGTACGGCTCACTAAAAGATGGCTTAATCCGTGATCGAATTGTTGTTGGCGTTCTGGATGACTCGTTGTCGGATCGACTTCAAGCCAAAGCAGATTTAACGCTCGAAACGGCAGTACAAATGAGTCGTCAGGCGGAAGCACGAAAGCAAAACAAGGATCTAATCCGCGGGAACGCCATCTCTGAAACGGCTACCGACCCTTCACGTGTGGATTTAGTGGAAAAGCACAAGCGAGATTCGAAACCGGACACCGGAGTACGGTCAAAGCCCGAACGTAAATGCATGTGGTGTGGCGGACAGCAACACAAGCGGCAATCATGCCCTGCAAAGGATGTAACTTGTAACAGCTGCCACAAAAGAGGTCATTTTCAAGCCGTTTGTCTCTGCAAAAAACAGGTGTCAAAGCGCCCAGCCGTCAACGAAGTAGCAGACCTTGAAGAAGTTGAAGTTCCCTTCCTGGGTGAAGTCTACAGCAGCGACGCAGATTTCTGGACCGCCGTTGTGAAGGTGGATGGCCACGAAACACATTTTAAGTTGGATACGGGAGCAGCTGTATCCATTGTCAGTGATCAGGAACCTTGGCTTAAAAAACACCAACTAACGAAATCCCAGCAGATTCTAAGGGGTCCAGGAGGCACCATTCTATCAGTTGTCGGCACCTTTCAAGCCACTTTGACATACGAAGAGCGTCAGATTTCCGAAACTGTGTTTGTTTTGAAAGATCAGCTATACTCCCTCCTTAGCAAGAAAGCTTGTGTTGGCCTCGGGTTAATCGCTCGAATTGGAGAGGTGAACACTCAGCCAGCAAACTTCATTGGAGAATTTCCTCAACTTTTCAGTGGCCTGGGAAAATTGGAAACCAAGTATCAAATCAAGCTTAACCCAGATGTAAAGTCAGTCTGCCTCTACACCCCAAGGAAAATACCTCACCCATTGTTGCCTAAAGTGAAGAAGGAAATCGACTCTATGCTCCAACAAGGTGTCATTTCTCCTGTCACTGTTCCCACAGAGTGGTGTTCTGGCATTGTCCCGGTCCCAAAACCTAATGGGCGTGTACGGATCTGTGTAGACCTGACTCCACTGAACAAAGCAGTACAGCGGGAAACTCATCCCATGGGTTCTGTTGATGAGAGCCTCGCGATGCTCGGCGAGAGTAGAGTGTTCACAAAATTAGATGCCAATAGTGGGTTTTGGCAAATTCCACTGGATGAAGACTCAAAATTACTGACCACCTTCATCACACCCTTCGGCCGCTTCTGCTTCAACCGTTTGCCCTTTGGAATTAGCTCCGCCCCGGAAATATTTCAGCGGACTATGTCAGGCATCTTGGAGGGCCTTGATGGAGTCATATGCCGGATGGATGATATCCTCATCCATGGAAGGAACCAGATTGAACATGACATACGTGTCCGAGCAGTTTTGTTCCGCCTTCAAAAAGCTGGACTGACACTGAACATTCAAAAATGTGAGTTTTCTCAAGGGAGACTCAAGTTCCTAGGACACATTGTCGATGCCCAGGGTGTCCATGCTGATCCAGAGAAGACAAATGCTATTGGTCATTTCCCAACTCCCAAGAATGTGACAGAACTACAGAGGTTCATGGGCATGGTTAACCAGCTGGGAAAATTTGTCCCTGGCTTAGCCGACATCAATGCACCCTTGCGCCAACTCCTTCGCAAAGATAGTGCTTGGTACTGGGGCGACGCTCAGCAAACAGCATTACAGCAAGTCAAGGAGAAGCTTGCCTCACCTGAAGTCCTTGCGCATTACGACCCCAGCCGTCAAACAGTCATTGCTGCAGATGCGTCATCAACAGGACTAGGAGCAGTTCTCCTTCAAATCCAAGATAATGGACAGCGTCGTCCTATCTGTTACATCTCCAGGTCCCTTAGTGATGCTGAAAAGAACTATGCGGTCATCGAGAAGGAAGCGCTCGCCTCAACATGGGCATGCGAACGCCTCGAAGAGTATGTCCTTGGACTCAGGTTTACCCTGGAAACAGATCACAAACCGCTTGTTCCACTCCTCACGACAACTGACTTGTCCAAGATGCCCCCAAGGATATTGCGCTTCTGCCTACGAATGATGCGATACAGCCCCGAAGTGTTACACGTTCCTGGTAAATGTCAGATTTCAGCTGATGCCCTGTCGCGTGCTCCAGCCAGCTCCCCAAACACCTCTGACATACAGTTTCTTGAGGAGGTTGAAACCTTTGCTAGCTCTACAGTGAACCAACTTCCTGCGACGGCTCAACGCCTTCAAGAGATTATAGAAGCTCAGAGAAATGATGAAGTACGCTTGCAAGTCAGAAGGTACTGCCAAGATGGTTGGCCAGTCTACATGCCCCATCAACCCCTACTCAAGCCCTACTGGGAGGGCAGAGCTCACTTAGCAGTTGTTGAAGATCTTCTCCTCTGTGATGAACGCATCGTCATCCCACCGGCCCAAAGATTAGAAGACAGAGAAGAGAAGACCAGTCCCTCTCAGCTCCCAGGTACTGTAGCCGAAGCTCCCATGCAGCCTGCCCGCAGTCAATCAGCTCCCTTACCATCTCAGCTCCCGGATACTACAACTGAAGCTCCACTACAGCCTGTCAGCAGTCAGACAGTTCCATTACAAACACGTTCAGGGAGAATTGTTAAGCCGCCTGATCGATTGGATCTCTAA

Transcript

g19309.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8I7P9	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P0CT41	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000002 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17919 all species →	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041577 all species →	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984 all species →	PROTEIN CBG26694	Interproscan

Gene Ontology

No Gene Ontology signature was detected for g19309.t1.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g19309.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.