Detailed information of g1936.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_039259243.1, uncharacterized protein LOC120335721 [Styela clava]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y2Y1DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapiens OX=9606 GN=POLR3K PE=1 SV=3
Q9CQZ7DNA-directed RNA polymerase III subunit RPC10 OS=Mus musculus OX=10090 GN=Polr3k PE=3 SV=1
Q2M2S7DNA-directed RNA polymerase III subunit RPC10 OS=Bos taurus OX=9913 GN=POLR3K PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF01096TFIIS_CTranscription factor S-II (TFIIS)DomainInterproscan
PF02150RNA_POL_M_15KDRNA polymerases M/15 Kd subunitDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR001222DomainZinc finger, TFIIS-typeInterproscan
IPR012164FamilyDNA-directed RNA polymerase subunit/transcription factor SInterproscan
IPR001529DomainDNA-directed RNA polymerase, M/15kDa subunitInterproscan
IPR034014DomainPol III subunit C11, C-terminal zinc ribbonInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan
PTHR11239DNA-DIRECTED RNA POLYMERASEInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0006386Biological Processtermination of RNA polymerase III transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03019RPC11, POLR3K; DNA-directed RNA polymerase III subunit RPC11-Transcription machineryko03021deepkoala

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