Detailed information of g19360.t1.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: XP_012557676.2, coronin-6 isoform X2 [Hydra vulgaris]
Species abbreviation HOCTO · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9WUM4Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2
Q9ULV4Coronin-1C OS=Homo sapiens OX=9606 GN=CORO1C PE=1 SV=1
B0R0D7Coronin-1C-A OS=Danio rerio OX=7955 GN=coro1ca PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002136 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08953
all species →		DUF1899Domain of unknown function (DUF1899)RepeatInterproscan
PF16300
all species →		WD40_4Type of WD40 repeatRepeatInterproscan
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR015505
all species →		FamilyCoroninInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR015048
all species →		DomainDomain of unknown function DUF1899Interproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10856
all species →		CORONINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007015
all species →		Biological Processactin filament organizationInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g19360.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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