Gene detail

Detailed information of g19376.t1 in Montipora capitata

Genomic Location: Sc0001013:30918...45192
NR annotation: CAH3180285.1, unnamed protein product [Porites lobata]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g19376.t1

atgagcaccagttcaggggagaagcgggtaacagtttacattgctcaagtttatgtggaacagtgtgaggaaaggtacaaagaacttaaacggactcataagaacaggcgttacagggatccactctttacaccagaatttatcgccgccgattgtagcaaggaacaacttgctgataaataccaagataaagatcttcagtccgacttaaccagctgccagttttcatttcattactcatttgagagctatgagcaggctgacgtgatgttaaagaatgcatgtgatagactcaaagttggaggattttttattggaacaactcctaatggctatgaactgattcggcggttggaaaagtcagaggacctttcctttgggaatgatgtatataaggttacctttgcgcaaaaagatgactatcccttatttggctgcaagtatgattttcatcttgaaggagtggttgattgctcagagttcctggtgtactttcctctgcttgaaaaaatggcagaaaaatataacatgaagcttgtttatagcaagactttccatgacttttttcaagagaaaacaaaggattcaaccagtttactttacaagatgaaagcacttgagggaacaatgtcaaaacctgaatgggaagctataggtatgtaccttgcatttgtgtttgtcaaaatcgaccctgaggcagaaaaacgaaagcaagaggaggccgaaagaagagaaagggagagggctgaacgagaagctcaaagaaaagagcgggagcgagaaagaaaagaaaaggccaaagccgaacgagagaaagctgagcaagctatggcagagaaggagaaagaagaagaatctaaatctgaatttgggaaagaagtcgaggatgaaaagattggaagtggaactggtagatggaaaggaagacagctctttgtctgtgagagggatcatgctgcatttgtcgatatagaaactgccatacccgagagagattttgataatgaccctggagaggctacgacaaggcgaacctcacgaaagcaggataaacaacgaagtggctcaatcaaacaggaaaaaagacagaatgacggaatgtttccagtgtcatcgagttatgatcttaatgaaacttcagtttttccaacatccctgtttactggcacaggaaagggaaaggcaaatttggggagacaactagaggttttgcagcagcagttacgagaaagaaagttaagggagacaagtttaattcagcaactaaaggaaaaagagcttcaacaagagagacagttaagggagatggcacagagttttgaagaacgaatcagagaaaaagaggaagaaaaaacaaaccttgaaacgcatttggggatgaaaaaccaagagttaagtgagctagagacaagccttacagaagctcagcaaatgattattgaactgcgtcgtcaggaatcttgtgattgggtcatttcccgtggtgaagtccaggtaaacgataaacgcttaggcaagggagcctggggaagtgtcaacgaagcaacatattgtggccgcaaagtagctgtgaagcaaatccatgaactgattctctcagctcacaacagacgtttgtttgagagagaaatgaacattgcttcaagatgccgccatccttgcttgttgcagtttattggagcaacaaatgatgacggaagtcctttgtttgtcactgagctcatggaattgagcttgcgagctttgctgggacaacgccaactcacggtaacagaaatatctgtaatttctttggatgtatctcgcgcgctaaactatcttcaccacatgaagccttctcccatcgttcatagggacatcagtagtgcaaatgtgttgctatggcgacagggtgaacagtggagaggcaaagtgtcagattatggcactgctaaatttgttcaacagaccatgacagtagcccctggtcctttgatttacagtgcgccagaagcagtttcttccaatcaaacatccaaggttgatgtgtatagctttggtgttcttctgtgtgaaatgtgcgttcgggaaatgccagatcccgaaagacgcgaagaacaagttcttcttgtaagaaaccgactcttccggaatctggtgcgacaatgccttcaggatgatcctgccatgagaccagacatgacacagattatccaggaattggaactgatcggctga

Transcript

g19376.t1

ATGAGCACCAGTTCAGGGGAGAAGCGGGTAACAGTTTACATTGCTCAAGTTTATGTGGAACAGTGTGAGGAAAGGTACAAAGAACTTAAACGGACTCATAAGAACAGGCGTTACAGGGATCCACTCTTTACACCAGAATTTATCGCCGCCGATTGTAGCAAGGAACAACTTGCTGATAAATACCAAGATAAAGATCTTCAGTCCGACTTAACCAGCTGCCAGTTTTCATTTCATTACTCATTTGAGAGCTATGAGCAGGCTGACGTGATGTTAAAGAATGCATGTGATAGACTCAAAGTTGGAGGATTTTTTATTGGAACAACTCCTAATGGCTATGAACTGATTCGGCGGTTGGAAAAGTCAGAGGACCTTTCCTTTGGGAATGATGTATATAAGGTTACCTTTGCGCAAAAAGATGACTATCCCTTATTTGGCTGCAAGTATGATTTTCATCTTGAAGGAGTGGTTGATTGCTCAGAGTTCCTGGTGTACTTTCCTCTGCTTGAAAAAATGGCAGAAAAATATAACATGAAGCTTGTTTATAGCAAGACTTTCCATGACTTTTttcaagagaaaacaaaggatTCAACCAGTTTACTTTACAAGATGAAAGCACTTGAGGGAACAATGTCAAAACCTGAATGGGAAGCTATAGGTATGTACCTTGCATTTGTGTTTGTCAAAATCGACCCTGAGGCAGAAAAACGAAAGCAAGAGGAGGCCGAAAGAAGAGAAAGGGAGAGGGCTGAACGAGAAGCTCAAAGAAAAGAGCGGGAgcgagaaagaaaagaaaaggccaaAGCCGAACGAGAGAAAGCTGAGCAAGCTATGGCAGAGAAGGAGAAAGAAGAAGAATCTAAATCTGAATTTGGGAAAGAAGTCGAGgatGAAAAGATTGGAAGTGGAACTGGTAGATGGAAAGGAAGACAGCTCTTTGTCTGTGAGAGGGATCATGCTGCATTTGTCGATATAGAAACTGCCATACCCGAGAGAGATTTTGATAATGACCCTGGAGAGGCTACGACAAGGCGAACCTCACGAAAGCAGGATAAACAACGAAGTGGCTCAATCAAACAGGAAAAAAGACAGAATGACGGAATGTTTCCAGTGTCATCGAGTTATGATCTTAATGAAACTTCAGTTTTTCCAACATCCCTGTTTACTGGCACAGGAAAGGGAAAGGCAAATTTGGGGAGACAACTAGAGGTTTTGCAGCAGCAGTTACGAGAAAGAAAGTTAAGGGAGACAAGTTTAATTCAGCAACTAAAGGAAAAAGAGCTTCAACAAGAGAGACAGTTAAGGGAGATGGCACAGAGTTTTGAAGAACGAATCAgagaaaaagaggaagaaaaaacaaaccttGAAACGCATTTGGGGATGAAAAACCAAGAGTTAAGTGAGCTAGAGACAAGCCTTACAGAAGCTCAGCAAATGATTATTGAACTGCGTCGTCAGGAATCTTGTGATTGGGTCATTTCCCGTGGTGAAGTCCAGGTAAACGATAAACGCTTAGGCAAGGGAGCCTGGGGAAGTGTCAACGAAGCAACATATTGTGGCCGCAAAGTAGCTGTGAAGCAAATCCATGAACTGATTCTCTCAGCTCACAACAGACGTTTGTTTGAGAGAGAAATGAACATTGCTTCAAGATGCCGCCATCCTTGCTTGTTGCAGTTTATTGGAGCAACAAATGATGACGGAAGTCCTTTGTTTGTCACTGAGCTCATGGAATTGAGCTTGCGAGCTTTGCTGGGACAACGCCAACTCACGGTAACAGAAATATCTGTAATTTCTTTGGATGTATCTCGCGCGCTAAACTATCTTCACCACATGAAGCCTTCTCCCATCGTTCATAGGGACATCAGTAGTGCAAATGTGTTGCTATGGCGACAGGGTGAACAGTGGAGAGGCAAAGTGTCAGATTATGGCACTGCTAAATTTGTTCAACAGACCATGACAGTAGCCCCTGGTCCTTTGATTTACAGTGCGCCAGAAGCAGTTTCTTCCAATCAAACATCCAAGGTTGATGTGTATAGCTTTGGTGTTCTTCTGTGTGAAATGTGCGTTCGGGAAATGCCAGATCCCGAAAGACGCGAAGAACAAGTTCTTCTTGTAAGAAACCGACTCTTCCGGAATCTGGTGCGACAATGCCTTCAGGATGATCCTGCCATGAGACCAGACATGACACAGATTATCCAGGAATTGGAACTGATCGGCTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4R7K1	mRNA cap guanine-N(7) methyltransferase OS=Macaca fascicularis OX=9541 GN=RNMT PE=2 SV=1
O43148	mRNA cap guanine-N(7) methyltransferase OS=Homo sapiens OX=9606 GN=RNMT PE=1 SV=1
Q28FT4	mRNA cap guanine-N(7) methyltransferase OS=Xenopus tropicalis OX=8364 GN=rnmt PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000208 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF03291 all species →	mRNA_G-N7_MeTrfase	mRNA (guanine-N(7))-methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036859 all species →	Homologous_superfamily	CAP Gly-rich domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR004971 all species →	Domain	mRNA (guanine-N(7))-methyltransferase domain	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR039753 all species →	Family	mRNA cap guanine-N7 methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12189 all species →	MRNA GUANINE-7- METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004482 all species →	Molecular Function	mRNA 5'-cap (guanine-N7-)-methyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005845 all species →	Cellular Component	obsolete mRNA cap binding complex	Interproscan
GO:0006370 all species →	Biological Process	7-methylguanosine mRNA capping	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g19376.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.