Detailed information of g19441.t1 in Acropora digitifera

Genomic Location: chr9Alt:6116270...6203594
NR annotation: XP_044173762.1, LOW QUALITY PROTEIN: nesprin-1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UPN3Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5 OS=Homo sapiens OX=9606 GN=MACF1 PE=1 SV=4
Q03001Dystonin OS=Homo sapiens OX=9606 GN=DST PE=1 SV=4
Q91ZU6Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435
all species →		SpectrinSpectrin repeatDomainInterproscan
PF17902
all species →		SH3_10SH3 domainDomainInterproscan
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR018159
all species →		RepeatSpectrin/alpha-actininInterproscan
IPR001589
all species →		Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR002017
all species →		RepeatSpectrin repeatInterproscan
IPR001715
all species →		DomainCalponin homology domainInterproscan
IPR041615
all species →		DomainDesmoplakin, SH3 domainInterproscan
IPR043197
all species →		FamilyPlakinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23169
all species →		ENVOPLAKINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005882
all species →		Cellular Componentintermediate filamentInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0042060
all species →		Biological Processwound healingInterproscan
GO:0045104
all species →		Biological Processintermediate filament cytoskeleton organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g19441.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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