Detailed information of g196.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032235649.2, WD repeat-containing protein on Y chromosome [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B7FF08WD repeat-containing protein on Y chromosome OS=Drosophila virilis OX=7244 GN=WDY PE=4 SV=1
B7FF07WD repeat-containing protein on Y chromosome OS=Drosophila mojavensis OX=7230 GN=WDY PE=4 SV=1
B7FF06WD repeat-containing protein on Y chromosome OS=Drosophila grimshawi OX=7222 GN=WDY PE=4 SV=1
Gene familySubfamily
Transcription Factors FamilyT-box
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF0024414-3-314-3-3 proteinRepeatInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF000037tm_37 transmembrane sweet-taste receptor of 3 GCPRDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00907T-boxT-boxDomainInterproscan
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000308Family14-3-3 proteinInterproscan
IPR023409Conserved_site14-3-3 protein, conserved siteInterproscan
IPR023410Domain14-3-3 domainInterproscan
IPR036815Homologous_superfamily14-3-3 domain superfamilyInterproscan
IPR017978DomainGPCR family 3, C-terminalInterproscan
IPR038550Homologous_superfamilyGPCR, family 3, nine cysteines domain superfamilyInterproscan
IPR000337FamilyGPCR, family 3Interproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR050726FamilyMetabotropic Glutamate ReceptorInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR003578FamilySmall GTPase RhoInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001699FamilyT-box transcription factorInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR016454FamilyCysteine desulfuraseInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR020578Binding_siteAminotransferase class-V, pyridoxal-phosphate binding siteInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR051242FamilyWD repeat and EF-hand domain-containing proteinInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46791EXPRESSED PROTEINInterproscan
PTHR1886014-3-3 PROTEINInterproscan
PTHR24060METABOTROPIC GLUTAMATE RECEPTORInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR24072RHO FAMILY GTPASEInterproscan
PTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan
PTHR11267T-BOX PROTEIN-RELATEDInterproscan
PTHR11601CYSTEINE DESULFURYLASE FAMILY MEMBERInterproscan
PTHR44324WD40 REPEAT DOMAIN 95Interproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0034613Biological Processprotein localizationInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0001640Molecular Functionadenylate cyclase inhibiting G protein-coupled glutamate receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007216Biological ProcessG protein-coupled glutamate receptor signaling pathwayInterproscan
GO:0051966Biological Processregulation of synaptic transmission, glutamatergicInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0031071Molecular Functioncysteine desulfurase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04487iscS, NFS1; cysteine desulfuraseEC:2.8.1.7
Chromosome and associated proteinsko03036deepkoala
Lectinsko04091deepkoala
Exosomeko04147deepkoala
Prokaryotic defense systemko02048deepkoala

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