Gene detail

Detailed information of g19745.t1 in Acropora digitifera

Genomic Location: chr9Alt:10436387...10463908
NR annotation: XP_029203532.2, N-alpha-acetyltransferase 25, NatB auxiliary subunit-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g19745.t1

ATGGCTTCACGCCATGTAGATGTGAACGAACGCCGGCTACGGCCTGTTTACGATGCGTTGGACAGCATGAACAACAAACAGGCTATTCATCTTGCAGACAAAATCCTAAAGAAACAGAAAGACTTACACTGCGCTAAGGCACTAAAAGCACTGGCATTACTGCGATCTGGTAAGGCTCCTGAAGGCGAGGTATTGCTGAAGGAAATAATGCAAGCTCAACCTGCTGATGATCCTACACTTCAAGCAATGACAATCTGTTACAGGGAGATGCAAAAACCTGAAATGATTCCTGCCATTTATGAGATGGCTCTCAAACACAGCCCAAATAATGAAGAGCTACACTCGCATTTGTTCATGGCATATGTCAGAATAGGAGAATACAAGAAACAGCAGCAGGCTGCCTTGAGTCTTTATAAACAATTTTCAAAGAACCCTTATTATTTCTGGGCAGTAATGAGTATTGTAATGCAGGCACTGGTGGCCAGCGATGAGAGACTGGGAAGGACAATGTTATTCCCTTTAGCGGAAAGAATGGTTATTAAATTTATTAATGAAGATAAAATTGAAGCAGAAGCAGAAGTACGCCTTTATCTCATGATTTTAGAAAAGTTAGAACACTATGAGAAGGCTCTGGGTGTTCTTAGAAGTAGTTTAGCTGTTAAATTAGTCAGTTACATGGATGAAAAAGAGGAAAAGGAGGCCAGTTATTTATTGAAGCTTTGCAGATGGCATGAGGCCAATTTGGCTTTCAAAAAGCTGATTTTGAAAAGGCCTGATCAGTGGTCATATTATCAGTCCTATTTCACCTCCGCATTCAGTCTGATAAAAGACGGATGGCAAGCAGATGATGAATTACAGGAAATTCCAGATTTTACCCCAGAGGCAGTCCATGAATTTTTGGCATCTGTTGTTGAAAATGAAAAGGCAAAGGAAACGAAATTGTGTAGAGGACCATTTTTAGCTCAATTAGAAATGGAGAAACTTTGTAAACAAGAATGTATATACTCAAAATTAGGTTCTAATTCAATTGTAGATTTATTAGTAGAGTATTTTAAACGATTTGGGGACAAACCTTCTTGCTTTTGGGACCTTGTGCCGTATGTTGACCTTGATCTACAGCACCAAGTTGAAGCTGAAAAGTTTATTGAAACATTAAAGTCCACTCTTTCATCTCCAAGTGATGAAGACACAGAGTCATCTCATGTAAAATATCTGCAGAGAAGGCTGACAATTGAACAAATTTCAAGACATTTGGGATTACATTCACTTCTCTGTTGTGACGATAAGATTGCTCTATCAAAGGAATACATGAAACAGCACAGAGATGGTTTGGTTTATGGTCAGAAACTATTGCCAACAGAGCTCCAGCACAGTGATGGATATGCCCAGCTCGCAGTTCACCTCTTATTGGATGTAAACAGAGAAAAAGGGGCTACCGATATGAACTGGCATCTTCTGATCATGTTAGAGAGTGCCTTGAAAACTAGTCCATCGAATCACCATCTCAAGCTGCTCTTAATGAGAGTGTACTGTTCAATGGGTGCCATTAGCCCGTGTTTGGTGCTTTTTCAAGGACTGGAGATAAAACACATTGAACGCGACACTCTTGGGTACTGCGTCACTCGTTATGTTGAAGCTCTTGGGCAATTTGAAGCAGCTTCATCTATGTTCCTGGGCACTTTGAAATTTTTTTATGGAAACCAGAAAAATACACCAGAACATATCATTGCAGCTTACAAGTATGGATCTTTTGAGAAGATTCCTGAATTCATTGATTTCAAGAAGCAACTTGATCTCTCCCTCCATTTTGCCAGTGTCAACTTTGAAAACATGCTTCTAGATGCTTTTCTGAAAACTAACAGTCTTGCAGATGCCCAAGGCTATTTCACAGAAAGCAACCTATTGGACAAGTGTTCCCTAGCAAGGGACTGGACCAAAGACTTGAAAGACAACAGAGATCTGAGAATACTTCAGTCATGGGACCCTCCAGAGAAACAGCTTTCAACAGATCAGGAGTCAAGGTGCATGGAACAGGAAGGTTTATGGCTCAGACTCAGAGTGCTTATGCTGAGGGCCCTGGCCTTAGCCTTTTCCTTATTACCCGATCCTCGGCAAGATGAACAAGCCATAAACAATGGTGCTTCTAACGAGCATTTGTCTCCCTTGGAGGAAGTCATCACTGAGCTAGCAGATGTTTTAGATATGGCTGATAAACACCCAGGAACTCGAGAAACGCTTCCTCCACTGGGCCCACCATGCTCCAGACTACAGGGTTTTATTGATGGCGAACATGGAAATACCTTGCTTGCCATGCTCAGGGTGTGTCAGCAGAGCCATCATCTCTTTAACGTAACAAAAGATGCCAGTTCAAAAGATTGCTGGTCAAGAATTCAAGAAGATTTAGAATTAGTTTCCAGAATCCTGAAAGAGTGTACAGCAAAGTGTATCGGGAATCTCACAGCAGGGAGTGAGGAGAAGACCATGTTTAATGGTTATGTTTTGGAACCACTAGTTCTTTTAGTGGAGAGCTTCTGCTGTGTTACTTTGATAACTGGTGTGTGCTGCAGATTTCTTCAGAAGCTGAAAGGTGGCAAAAAAGCCAGGAAAAAGAAAGCTGTTCCTGCACAGGCAAATGAAGAAGTAATGCCATTCAAGGAGTTCCTGTGCACTCTGCAATCATCTATGGCTGATCTCCATACCGCACTTGTAGAAGTAAACATAGCCCAATTGTCAGATGATCTTTTGGAACTTAACCTGGTCGAACTTGACAAGGAGACAAAGTCTTCAATTGTATCAGAGATTTGGGAGAAGTTGCAAACCAGTTACAAGAAGTCAGTCAAAGAAATCTCAGAACTTTTACATCTCAAAATGAAGTTTGCCAAATCTCTTGAAATCTAA

Transcript

chr9Alt.g19745.t1

CTCGCTTCTTGGAAACATGTGAGCCTGAAATTCCAACATGGCTTCACGCCATGTAGATGTGAACGAACGCCGGCTACGGCCTGTTTACGATGCGTTGGACAGCATGAACAACAAACAGGCTATTCATCTTGCAGACAAAATCCTAAAGAAACAGAAAGACTTACACTGCGCTAAGGCACTAAAAGCACTGGCATTACTGCGATCTGGTAAGGCTCCTGAAGGCGAGGTATTGCTGAAGGAAATAATGCAAGCTCAACCTGCTGATGATCCTACACTTCAAGCAATGACAATCTGTTACAGGGAGATGCAAAAACCTGAAATGATTCCTGCCATTTATGAGATGGCTCTCAAACACAGCCCAAATAATGAAGAGCTACACTCGCATTTGTTCATGGCATATGTCAGAATAGGAGAATACAAGAAACAGCAGCAGGCTGCCTTGAGTCTTTATAAACAATTTTCAAAGAACCCTTATTATTTCTGGGCAGTAATGAGTATTGTAATGCAGGCACTGGTGGCCAGCGATGAGAGACTGGGAAGGACAATGTTATTCCCTTTAGCGGAAAGAATGGTTATTAAATTTATTAATGAAGATAAAATTGAAGCAGAAGCAGAAGTACGCCTTTATCTCATGATTTTAGAAAAGTTAGAACACTATGAGAAGGCTCTGGGTGTTCTTAGAAGTAGTTTAGCTGTTAAATTAGTCAGTTACATGGATGAAAAAGAGGAAAAGGAGGCCAGTTATTTATTGAAGCTTTGCAGATGGCATGAGGCCAATTTGGCTTTCAAAAAGCTGATTTTGAAAAGGCCTGATCAGTGGTCATATTATCAGTCCTATTTCACCTCCGCATTCAGTCTGATAAAAGACGGATGGCAAGCAGATGATGAATTACAGGAAATTCCAGATTTTACCCCAGAGGCAGTCCATGAATTTTTGGCATCTGTTGTTGAAAATGAAAAGGCAAAGGAAACGAAATTGTGTAGAGGACCATTTTTAGCTCAATTAGAAATGGAGAAACTTTGTAAACAAGAATGTATATACTCAAAATTAGGTTCTAATTCAATTGTAGATTTATTAGTAGAGTATTTTAAACGATTTGGGGACAAACCTTCTTGCTTTTGGGACCTTGTGCCGTATGTTGACCTTGATCTACAGCACCAAGTTGAAGCTGAAAAGTTTATTGAAACATTAAAGTCCACTCTTTCATCTCCAAGTGATGAAGACACAGAGTCATCTCATGTAAAATATCTGCAGAGAAGGCTGACAATTGAACAAATTTCAAGACATTTGGGATTACATTCACTTCTCTGTTGTGACGATAAGATTGCTCTATCAAAGGAATACATGAAACAGCACAGAGATGGTTTGGTTTATGGTCAGAAACTATTGCCAACAGAGCTCCAGCACAGTGATGGATATGCCCAGCTCGCAGTTCACCTCTTATTGGATGTAAACAGAGAAAAAGGGGCTACCGATATGAACTGGCATCTTCTGATCATGTTAGAGAGTGCCTTGAAAACTAGTCCATCGAATCACCATCTCAAGCTGCTCTTAATGAGAGTGTACTGTTCAATGGGTGCCATTAGCCCGTGTTTGGTGCTTTTTCAAGGACTGGAGATAAAACACATTGAACGCGACACTCTTGGGTACTGCGTCACTCGTTATGTTGAAGCTCTTGGGCAATTTGAAGCAGCTTCATCTATGTTCCTGGGCACTTTGAAATTTTTTTATGGAAACCAGAAAAATACACCAGAACATATCATTGCAGCTTACAAGTATGGATCTTTTGAGAAGATTCCTGAATTCATTGATTTCAAGAAGCAACTTGATCTCTCCCTCCATTTTGCCAGTGTCAACTTTGAAAACATGCTTCTAGATGCTTTTCTGAAAACTAACAGTCTTGCAGATGCCCAAGGCTATTTCACAGAAAGCAACCTATTGGACAAGTGTTCCCTAGCAAGGGACTGGACCAAAGACTTGAAAGACAACAGAGATCTGAGAATACTTCAGTCATGGGACCCTCCAGAGAAACAGCTTTCAACAGATCAGGAGTCAAGGTGCATGGAACAGGAAGGTTTATGGCTCAGACTCAGAGTGCTTATGCTGAGGGCCCTGGCCTTAGCCTTTTCCTTATTACCCGATCCTCGGCAAGATGAACAAGCCATAAACAATGGTGCTTCTAACGAGCATTTGTCTCCCTTGGAGGAAGTCATCACTGAGCTAGCAGATGTTTTAGATATGGCTGATAAACACCCAGGAACTCGAGAAACGCTTCCTCCACTGGGCCCACCATGCTCCAGACTACAGGGTTTTATTGATGGCGAACATGGAAATACCTTGCTTGCCATGCTCAGGGTGTGTCAGCAGAGCCATCATCTCTTTAACGTAACAAAAGATGCCAGTTCAAAAGATTGCTGGTCAAGAATTCAAGAAGATTTAGAATTAGTTTCCAGAATCCTGAAAGAGTGTACAGCAAAGTGTATCGGGAATCTCACAGCAGGGAGTGAGGAGAAGACCATGTTTAATGGTTATGTTTTGGAACCACTAGTTCTTTTAGTGGAGAGCTTCTGCTGTGTTACTTTGATAACTGGTGTGTGCTGCAGATTTCTTCAGAAGCTGAAAGGTGGCAAAAAAGCCAGGAAAAAGAAAGCTGTTCCTGCACAGGCAAATGAAGAAGTAATGCCATTCAAGGAGTTCCTGTGCACTCTGCAATCATCTATGGCTGATCTCCATACCGCACTTGTAGAAGTAAACATAGCCCAATTGTCAGATGATCTTTTGGAACTTAACCTGGTCGAACTTGACAAGGAGACAAAGTCTTCAATTGTATCAGAGATTTGGGAGAAGTTGCAAACCAGTTACAAGAAGTCAGTCAAAGAAATCTCAGAACTTTTACATCTCAAAATGAAGTTTGCCAAATCTCTTGAAATCTAACCACACGTGAAAGGTAAAGAAGGAAAAGTCAAAACTAGCAAGAGTGCAACAGTCTTTGTGGAGAAGTCTCACTCGGCTACAGGACGGCAAGGCAATCATCTTCCCGTTCTAAGTAAACAATGTGGAGGACA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14CX7	N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Homo sapiens OX=9606 GN=NAA25 PE=1 SV=1
Q8BWZ3	N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1
Q6QI44	N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Rattus norvegicus OX=10116 GN=Naa25 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09797 all species →	NatB_MDM20	N-acetyltransferase B complex (NatB) non catalytic subunit	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019183 all species →	Family	N-alpha-acetyltransferase 25, NatB auxiliary subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22767 all species →	N-TERMINAL ACETYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017196 all species →	Biological Process	N-terminal peptidyl-methionine acetylation	Interproscan
GO:0031416 all species →	Cellular Component	NatB complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17973	NAA25, MDM20; N-terminal acetyltransferase B complex non-catalytic subunit	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.