Detailed information of g19822.t3 in Acropora digitifera

Genomic Location: chr9Alt:12579020...12580488
NR annotation: XP_044173976.1, protein strawberry notch homolog 1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5F371Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1
Q5BJL5Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2
Q689Z5Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13871
all species →		Helicase_C_4C-terminal domain on Strawberry notch homologueDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026741
all species →		FamilyProtein strawberry notchInterproscan
IPR026937
all species →		DomainStrawberry notch, helicase C domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12706
all species →		STRAWBERRY NOTCH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490
all species →		Molecular Functionchromatin DNA bindingInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g19822.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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