Detailed information of g19840.t1 in Acropora digitifera

Genomic Location: chr9Alt:12960383...12963036
NR annotation: XP_015768715.1, PREDICTED: tigger transposable element-derived protein 6-like [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q17RP2Tigger transposable element-derived protein 6 OS=Homo sapiens OX=9606 GN=TIGD6 PE=1 SV=2
B2RRL2Jerky protein homolog-like OS=Mus musculus OX=10090 GN=Jrkl PE=2 SV=1
Q9Y4A0Jerky protein homolog-like OS=Homo sapiens OX=9606 GN=JRKL PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184
all species →		DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03221
all species →		HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004875
all species →		DomainDDE superfamily endonuclease domainInterproscan
IPR050863
all species →		FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →		TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g19840.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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